EnhancerDB
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  3. rs187161727[chr17:62958798]
Enhancers that have rs187161727[chr17:62958798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 62958497 62958860 vista25538
VISTA
Transcript factors that have rs187161727[chr17:62958798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62958794 62958803 NFIX JASPAR yes 21274874
chr17 62958794 62958803 NFIX JASPAR yes 55331779
chr17 62958795 62958801 NFIC JASPAR yes 21274875
chr17 62958795 62958801 NFIC JASPAR yes 55331780
chr17 62958795 62958809 TLX1 JASPAR yes 21274876
chr17 62958795 62958809 TLX1 JASPAR yes 55331781
chr17 62958796 62958810 TLX1 JASPAR yes 21274877
chr17 62958796 62958810 TLX1 JASPAR yes 55331782
Genes associated with rs187161727[chr17:62958798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More