EnhancerDB
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  3. vista25540[chr17:62981100-62981441]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25540[chr17:62981100-62981441]
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Tissue distribution of vista25540
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Transcription factor that possibly regulate vista25540[chr17:62981100-62981441]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 62981151 62981814 TCF7L2 UCSC Txn Factor no Conserved 108283124
chr17 62981180 62981685 GATA3 UCSC Txn Factor no Conserved 108283126
chr17 62981182 62981722 EP300 UCSC Txn Factor no Conserved 108283127
chr17 62981208 62981652 GATA2 UCSC Txn Factor no Conserved 108283129
chr17 62981339 62981679 CEBPB UCSC Txn Factor no Conserved 108283144
chr17 62981150 62981165 FOXP1 JASPAR yes 21274916
chr17 62981150 62981165 FOXP1 JASPAR yes 55335322
chr17 62981153 62981164 FOXP2 JASPAR yes 21274917
chr17 62981153 62981164 FOXP2 JASPAR yes 55335323
chr17 62981157 62981163 HiNF-A TRANSFAC yes 21274918
chr17 62981157 62981163 HiNF-A TRANSFAC yes 55335324
chr17 62981160 62981170 TEAD1 JASPAR yes 21274919
chr17 62981160 62981170 TEAD4 JASPAR yes 21274920
chr17 62981160 62981170 TEAD1 JASPAR yes 55335325
chr17 62981160 62981170 TEAD4 JASPAR yes 55335326
chr17 62981162 62981177 LEF1 JASPAR yes 21274921
chr17 62981162 62981177 LEF1 JASPAR yes 55335327
chr17 62981163 62981177 TCF7L2 JASPAR yes 21274922
chr17 62981163 62981177 TCF7L2 JASPAR yes 55335328
chr17 62981166 62981172 LEF1 TRANSFAC yes 21274923
chr17 62981166 62981172 TCF4 TRANSFAC yes 21274924
chr17 62981166 62981172 LEF1 TRANSFAC yes 55335329
chr17 62981166 62981172 TCF4 TRANSFAC yes 55335330
chr17 62981171 62981183 FOXI1 JASPAR yes 21274925
chr17 62981171 62981183 FOXI1 JASPAR yes 55335331
chr17 62981171 62981191 RREB1 JASPAR yes 21274926
chr17 62981171 62981191 RREB1 JASPAR yes 55335332
chr17 62981190 62981208 RARA JASPAR yes 21274927
chr17 62981190 62981208 RARA JASPAR yes 55335333
chr17 62981240 62981250 GSX2 JASPAR yes 21274928
chr17 62981240 62981250 GSX2 JASPAR yes 55335334
chr17 62981241 62981249 BSX JASPAR yes 21274929
chr17 62981241 62981249 BSX JASPAR yes 55335335
chr17 62981260 62981269 NFIX JASPAR yes 21274930
chr17 62981260 62981269 NFIX JASPAR yes 55335336
chr17 62981260 62981270 NFIA JASPAR yes 21274931
chr17 62981260 62981270 NFIA JASPAR yes 55335337
chr17 62981262 62981268 NFIC JASPAR yes 21274932
chr17 62981262 62981268 NFIC JASPAR yes 55335338
chr17 62981279 62981283 YY1 TRANSFAC yes 21274933
chr17 62981279 62981283 YY1 TRANSFAC yes 55335339
chr17 62981286 62981292 HiNF-A TRANSFAC yes 21274934
chr17 62981286 62981292 HiNF-A TRANSFAC yes 55335340
chr17 62981317 62981321 YY1 TRANSFAC yes 21274935
chr17 62981317 62981321 YY1 TRANSFAC yes 55335341
chr17 62981341 62981357 POU4F2 JASPAR yes 21274936
chr17 62981341 62981357 POU4F2 JASPAR yes 55335342
chr17 62981344 62981355 CDX2 JASPAR yes 21274937
chr17 62981344 62981355 CDX2 JASPAR yes 55335343
chr17 62981344 62981358 POU4F1 JASPAR yes 21274938
chr17 62981344 62981358 POU4F1 JASPAR yes 55335344
chr17 62981344 62981360 POU4F3 JASPAR yes 21274939
chr17 62981344 62981360 POU4F3 JASPAR yes 55335345
chr17 62981345 62981361 POU4F2 JASPAR yes 21274940
chr17 62981345 62981361 POU4F3 JASPAR yes 21274941
chr17 62981345 62981361 POU4F2 JASPAR yes 55335346
chr17 62981345 62981361 POU4F3 JASPAR yes 55335347
chr17 62981348 62981362 FOXF2 JASPAR yes 21274942
chr17 62981348 62981362 FOXF2 JASPAR yes 55335348
chr17 62981350 62981354 YY1 TRANSFAC yes 21274943
chr17 62981350 62981354 YY1 TRANSFAC yes 55335349
chr17 62981350 62981360 HOXC10 JASPAR yes 21274944
chr17 62981350 62981360 HOXD11 JASPAR yes 21274945
chr17 62981350 62981360 HOXC10 JASPAR yes 55335350
chr17 62981350 62981360 HOXD11 JASPAR yes 55335351
chr17 62981350 62981361 HOXC11 JASPAR yes 21274946
chr17 62981350 62981361 HOXD12 JASPAR yes 21274947
chr17 62981350 62981361 HOXC11 JASPAR yes 55335352
chr17 62981350 62981361 HOXD12 JASPAR yes 55335353
chr17 62981351 62981362 CDX2 JASPAR yes 21274948
chr17 62981351 62981362 CDX2 JASPAR yes 55335354
chr17 62981368 62981383 STAT2 JASPAR yes 21274949
chr17 62981368 62981383 STAT2 JASPAR yes 55335355
chr17 62981369 62981383 STAT1 JASPAR yes 21274950
chr17 62981369 62981383 STAT1 JASPAR yes 55335356
chr17 62981376 62981391 STAT1 JASPAR yes 21274951
chr17 62981376 62981391 STAT1 JASPAR yes 55335357
chr17 62981378 62981389 STAT1 JASPAR yes 21274952
chr17 62981378 62981389 STAT3 JASPAR yes 21274953
chr17 62981378 62981389 STAT1 JASPAR yes 55335358
chr17 62981378 62981389 STAT3 JASPAR yes 55335359
chr17 62981386 62981396 MYF6 JASPAR yes 21274954
chr17 62981386 62981396 NEUROG2 JASPAR yes 21274955
chr17 62981386 62981396 MYF6 JASPAR yes 55335360
chr17 62981386 62981396 NEUROG2 JASPAR yes 55335361
chr17 62981405 62981420 FOXA1 JASPAR yes 21274956
chr17 62981405 62981420 FOXA1 JASPAR yes 55335362
chr17 62981409 62981413 YY1 TRANSFAC yes 21274957
chr17 62981409 62981413 YY1 TRANSFAC yes 55335363
chr17 62981426 62981440 GATA2 JASPAR yes 21274958
chr17 62981426 62981440 GATA2 JASPAR yes 55335364
SNP sites on vista25540[chr17:62981100-62981441]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 62981233 rs62073275 A G
EP300 GATA2 GATA3 TCF7L2
4986857
chr17 62981274 rs140661712 A G
EP300 GATA2 GATA3 TCF7L2
4986858
chr17 62981333 rs17685439 A C,T
EP300 GATA2 GATA3 TCF7L2
4986859
Genes possibly regulated by vista25540[chr17:62981100-62981441]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 62850430 62915598 - LRRC37A3 ENSG00000176809.6 62915598 0.88 0.98 16164 34498
chr17 63006833 63052957 - GNA13 ENSG00000120063.5 63052957 0.72 0.99 16165 28484
Expression level of Genes
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miRNAs possibly regulated by vista25540[chr17:62981100-62981441]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results