EnhancerDB
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  3. rs62073275[chr17:62981233]
Enhancers that have rs62073275[chr17:62981233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 62981100 62981441 vista25540
VISTA
Transcript factors that have rs62073275[chr17:62981233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62981100 62981576 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780720
chr17 62981100 62981576 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108283123
chr17 62981151 62981814 TCF7L2 UCSC Txn Factor no Conserved 108283124
chr17 62981180 62981650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21780721
chr17 62981180 62981650 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108283125
chr17 62981180 62981685 GATA3 UCSC Txn Factor no Conserved 108283126
chr17 62981182 62981722 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21780722
chr17 62981182 62981722 EP300 UCSC Txn Factor no Conserved 108283127
chr17 62981182 62981722 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108283128
chr17 62981208 62981652 GATA2 UCSC Txn Factor no Conserved 108283129
chr17 62981212 62981656 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21780723
chr17 62981212 62981656 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108283130
chr17 62981218 62981814 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21780724
chr17 62981218 62981814 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108283131
chr17 62981232 62981576 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21780725
chr17 62981232 62981576 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108283132
Genes associated with rs62073275[chr17:62981233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More