EnhancerDB
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  3. vista25640[chr17:65437128-65437554]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25640[chr17:65437128-65437554]
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Tissue distribution of vista25640
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Transcription factor that possibly regulate vista25640[chr17:65437128-65437554]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65437124 65437135 DMRT3 JASPAR yes 21279560
chr17 65437124 65437135 DMRT3 JASPAR yes 55504608
chr17 65437146 65437150 NFE TRANSFAC yes 21279561
chr17 65437146 65437150 NFE TRANSFAC yes 55504609
chr17 65437151 65437169 ESR2 JASPAR yes 21279562
chr17 65437151 65437169 ESR2 JASPAR yes 55504610
chr17 65437156 65437159 MYB TRANSFAC yes 21279563
chr17 65437156 65437159 MYB TRANSFAC yes 55504611
chr17 65437164 65437170 LEF1 TRANSFAC yes 21279564
chr17 65437164 65437170 SOX10 JASPAR yes 21279565
chr17 65437164 65437170 LEF1 TRANSFAC yes 55504612
chr17 65437164 65437170 SOX10 JASPAR yes 55504613
chr17 65437164 65437179 FOXP1 JASPAR yes 21279566
chr17 65437164 65437179 FOXP1 JASPAR yes 55504614
chr17 65437173 65437176 MYB TRANSFAC yes 21279567
chr17 65437173 65437176 MYB TRANSFAC yes 55504615
chr17 65437212 65437226 TCF7L2 JASPAR yes 21279568
chr17 65437212 65437226 TCF7L2 JASPAR yes 55504616
chr17 65437228 65437238 ETV5 JASPAR yes 21279569
chr17 65437228 65437238 ETV5 JASPAR yes 55504617
chr17 65437242 65437253 NFE2L2 JASPAR yes 21279570
chr17 65437242 65437253 NFE2L2 JASPAR yes 55504618
chr17 65437243 65437251 FOXC1 JASPAR yes 21279571
chr17 65437243 65437251 FOXC1 JASPAR yes 55504619
chr17 65437245 65437252 NKX3-1 JASPAR yes 21279572
chr17 65437245 65437252 NKX3-1 JASPAR yes 55504620
chr17 65437249 65437252 MYB TRANSFAC yes 21279573
chr17 65437249 65437252 MYB TRANSFAC yes 55504621
chr17 65437253 65437264 FLI1 JASPAR yes 21279574
chr17 65437253 65437264 FLI1 JASPAR yes 55504622
chr17 65437254 65437259 H4TF1 TRANSFAC yes 21279575
chr17 65437254 65437259 H4TF1 TRANSFAC yes 55504623
chr17 65437254 65437264 ERF JASPAR yes 21279576
chr17 65437254 65437264 ERG JASPAR yes 21279577
chr17 65437254 65437264 ETS1 JASPAR yes 21279578
chr17 65437254 65437264 FLI1 JASPAR yes 21279579
chr17 65437254 65437264 ERF JASPAR yes 55504624
chr17 65437254 65437264 ERG JASPAR yes 55504625
chr17 65437254 65437264 ETS1 JASPAR yes 55504626
chr17 65437254 65437264 FLI1 JASPAR yes 55504627
chr17 65437254 65437265 ETV2 JASPAR yes 21279580
chr17 65437254 65437265 ETV2 JASPAR yes 55504628
chr17 65437254 65437266 ELF1 JASPAR yes 21279581
chr17 65437254 65437266 ELF1 JASPAR yes 55504629
chr17 65437254 65437267 ELF1 JASPAR yes 21279582
chr17 65437254 65437267 ELF1 JASPAR yes 55504630
chr17 65437254 65437268 SPIC JASPAR yes 21279583
chr17 65437254 65437268 SPIC JASPAR yes 55504631
chr17 65437255 65437263 FEV JASPAR yes 21279584
chr17 65437255 65437263 FEV JASPAR yes 55504632
chr17 65437318 65437323 GATA1 TRANSFAC yes 21279585
chr17 65437318 65437323 GATA1 TRANSFAC yes 55504633
chr17 65437348 65437362 CREB3 JASPAR yes 21279586
chr17 65437348 65437362 CREB3 JASPAR yes 55504634
chr17 65437349 65437363 XBP1 JASPAR yes 21279587
chr17 65437349 65437363 XBP1 JASPAR yes 55504635
chr17 65437379 65437391 FOXI1 JASPAR yes 21279588
chr17 65437379 65437391 FOXI1 JASPAR yes 55504636
chr17 65437382 65437386 YY1 TRANSFAC yes 21279589
chr17 65437382 65437386 YY1 TRANSFAC yes 55504637
chr17 65437392 65437402 ZNF740 JASPAR yes 21279590
chr17 65437392 65437402 ZNF740 JASPAR yes 55504638
chr17 65437393 65437403 SP1 JASPAR yes 21279591
chr17 65437393 65437403 ZNF740 JASPAR yes 21279592
chr17 65437393 65437403 SP1 JASPAR yes 55504639
chr17 65437393 65437403 ZNF740 JASPAR yes 55504640
chr17 65437393 65437413 RREB1 JASPAR yes 21279593
chr17 65437393 65437413 RREB1 JASPAR yes 55504641
chr17 65437394 65437404 ZNF740 JASPAR yes 21279594
chr17 65437394 65437404 ZNF740 JASPAR yes 55504642
chr17 65437394 65437408 GLIS2 JASPAR yes 21279595
chr17 65437394 65437408 GLIS2 JASPAR yes 55504643
chr17 65437395 65437405 SP1 JASPAR yes 21279596
chr17 65437395 65437405 SP1 JASPAR yes 55504644
chr17 65437398 65437404 SP1 TRANSFAC yes 21279597
chr17 65437398 65437404 SP1 TRANSFAC yes 55504645
chr17 65437414 65437420 MZF1 JASPAR yes 21279598
chr17 65437414 65437420 MZF1 JASPAR yes 55504646
chr17 65437419 65437434 MEF2C JASPAR yes 21279599
chr17 65437419 65437434 MEF2C JASPAR yes 55504647
chr17 65437420 65437432 MEF2A JASPAR yes 21279600
chr17 65437420 65437432 MEF2D JASPAR yes 21279601
chr17 65437420 65437432 MEF2A JASPAR yes 55504648
chr17 65437420 65437432 MEF2D JASPAR yes 55504649
chr17 65437422 65437426 YY1 TRANSFAC yes 21279602
chr17 65437422 65437426 YY1 TRANSFAC yes 55504650
chr17 65437442 65437446 YY1 TRANSFAC yes 21279603
chr17 65437442 65437446 YY1 TRANSFAC yes 55504651
chr17 65437448 65437456 TBX5 JASPAR yes 21279604
chr17 65437448 65437456 TBX5 JASPAR yes 55504652
chr17 65437448 65437457 ZEB1 JASPAR yes 21279605
chr17 65437448 65437457 ZEB1 JASPAR yes 55504653
chr17 65437450 65437459 SNAI2 JASPAR yes 21279606
chr17 65437450 65437459 SNAI2 JASPAR yes 55504654
chr17 65437451 65437456 USF2 TRANSFAC yes 21279607
chr17 65437451 65437456 USF2 TRANSFAC yes 55504655
chr17 65437452 65437466 JUN JASPAR yes 21279608
chr17 65437452 65437466 JUN JASPAR yes 55504656
chr17 65437455 65437466 FOSL2 JASPAR yes 21279609
chr17 65437455 65437466 JUNB JASPAR yes 21279610
chr17 65437455 65437466 FOSL2 JASPAR yes 55504657
chr17 65437455 65437466 JUNB JASPAR yes 55504658
chr17 65437456 65437467 FOS JASPAR yes 21279611
chr17 65437456 65437467 FOSL1 JASPAR yes 21279612
chr17 65437456 65437467 JUND JASPAR yes 21279613
chr17 65437456 65437467 NFE2 JASPAR yes 21279614
chr17 65437456 65437467 FOS JASPAR yes 55504659
chr17 65437456 65437467 FOSL1 JASPAR yes 55504660
chr17 65437456 65437467 JUND JASPAR yes 55504661
chr17 65437456 65437467 NFE2 JASPAR yes 55504662
chr17 65437457 65437466 JDP2 JASPAR yes 21279615
chr17 65437457 65437466 JDP2 JASPAR yes 55504663
chr17 65437471 65437482 NFE2 JASPAR yes 21279616
chr17 65437471 65437482 NFE2 JASPAR yes 55504664
chr17 65437494 65437515 REST JASPAR yes 21279617
chr17 65437494 65437515 REST JASPAR yes 55504665
chr17 65437498 65437502 NFE TRANSFAC yes 21279618
chr17 65437498 65437502 NFE TRANSFAC yes 55504666
chr17 65437520 65437536 NFYA JASPAR yes 21279619
chr17 65437520 65437536 NFYA JASPAR yes 55504667
chr17 65437547 65437562 FOXA1 JASPAR yes 21279620
chr17 65437547 65437562 FOXA1 JASPAR yes 55504668
chr17 65437548 65437559 FOXB1 JASPAR yes 21279621
chr17 65437548 65437559 FOXB1 JASPAR yes 55504669
SNP sites on vista25640[chr17:65437128-65437554]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65437160 rs112739033 C T
ESR2
5004970
chr17 65437228 rs78103746 A C
ETV5
5004971
chr17 65437393 rs34717379 G GC
RREB1 SP1 ZNF740
5004972
chr17 65437393 rs879316541 G GC,GCC
RREB1 SP1 ZNF740
5004973
chr17 65437398 rs144622444 C A
GLIS2 RREB1 SP1 ZNF740
5004974
chr17 65437500 rs180696862 T C
NFE REST
5004975
chr17 65437535 rs538232862 G A
NFYA
5004976
Genes possibly regulated by vista25640[chr17:65437128-65437554]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65334032 65362743 - PSMD12 ENSG00000197170.5 65362743 0.83 0.99 16177 25615
chr17 65373575 65693372 + PITPNC1 ENSG00000154217.10 65373575 0.77 1.0 16178 36447
Expression level of Genes
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miRNAs possibly regulated by vista25640[chr17:65437128-65437554]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results