EnhancerDB
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Enhancers that have rs879316541[chr17:65437393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr17 65437128 65437554 vista25640
VISTA
Transcript factors that have rs879316541[chr17:65437393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65437060 65437524 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21782228
chr17 65437060 65437524 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108285857
chr17 65437144 65437500 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21782229
chr17 65437144 65437500 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108285858
chr17 65437214 65437584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782230
chr17 65437214 65437584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285859
chr17 65437252 65437542 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782231
chr17 65437252 65437542 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285860
chr17 65437342 65437622 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285861
chr17 65437343 65437579 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782232
chr17 65437343 65437579 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285862
chr17 65437370 65437561 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285863
chr17 65437384 65437571 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108285864
chr17 65437392 65437402 ZNF740 JASPAR yes 21279590
chr17 65437392 65437402 ZNF740 JASPAR yes 55504638
chr17 65437393 65437403 SP1 JASPAR yes 21279591
chr17 65437393 65437403 ZNF740 JASPAR yes 21279592
chr17 65437393 65437403 SP1 JASPAR yes 55504639
chr17 65437393 65437403 ZNF740 JASPAR yes 55504640
chr17 65437393 65437413 RREB1 JASPAR yes 21279593
chr17 65437393 65437413 RREB1 JASPAR yes 55504641
Genes associated with rs879316541[chr17:65437393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More