EnhancerDB
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  3. vista25644[chr17:65471645-65472025]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25644[chr17:65471645-65472025]
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Tissue distribution of vista25644
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Transcription factor that possibly regulate vista25644[chr17:65471645-65472025]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 65471509 65471908 CTCF UCSC Txn Factor no Conserved 108285904
chr17 65471509 65471908 CTCF UCSC Txn Factor no Conserved 108285905
chr17 65471565 65471845 SMC3 UCSC Txn Factor no Conserved 108285922
chr17 65471573 65471837 RAD21 UCSC Txn Factor no Conserved 108285928
chr17 65471688 65471701 JUN JASPAR yes 21279790
chr17 65471688 65471701 JUN JASPAR yes 55508927
chr17 65471689 65471702 ATF4 JASPAR yes 21279791
chr17 65471689 65471702 ATF4 JASPAR yes 55508928
chr17 65471692 65471711 CTCF JASPAR yes 21279792
chr17 65471692 65471711 CTCF JASPAR yes 55508929
chr17 65471694 65471706 TAL1 JASPAR yes 21279793
chr17 65471694 65471706 TAL1 JASPAR yes 55508930
chr17 65471696 65471702 YY1 JASPAR yes 21279794
chr17 65471696 65471702 YY1 JASPAR yes 55508931
chr17 65471696 65471706 NEUROG2 JASPAR yes 21279795
chr17 65471696 65471706 NEUROG2 JASPAR yes 55508932
chr17 65471696 65471708 TAL1 JASPAR yes 21279796
chr17 65471696 65471708 TAL1 JASPAR yes 55508933
chr17 65471728 65471734 TCF4 TRANSFAC yes 21279797
chr17 65471728 65471734 TCF4 TRANSFAC yes 55508934
chr17 65471744 65471750 LEF1 TRANSFAC yes 21279798
chr17 65471744 65471750 SOX10 JASPAR yes 21279799
chr17 65471744 65471750 LEF1 TRANSFAC yes 55508935
chr17 65471744 65471750 SOX10 JASPAR yes 55508936
chr17 65471744 65471759 FOXP1 JASPAR yes 21279800
chr17 65471744 65471759 FOXP1 JASPAR yes 55508937
chr17 65471745 65471756 FOXP2 JASPAR yes 21279801
chr17 65471745 65471756 FOXP2 JASPAR yes 55508938
chr17 65471745 65471759 FOXF2 JASPAR yes 21279802
chr17 65471745 65471759 FOXF2 JASPAR yes 55508939
chr17 65471746 65471754 FOXG1 JASPAR yes 21279803
chr17 65471746 65471754 FOXO3 JASPAR yes 21279804
chr17 65471746 65471754 FOXG1 JASPAR yes 55508940
chr17 65471746 65471754 FOXO3 JASPAR yes 55508941
chr17 65471747 65471757 HOXA13 JASPAR yes 21279805
chr17 65471747 65471757 HOXB13 JASPAR yes 21279806
chr17 65471747 65471757 HOXD13 JASPAR yes 21279807
chr17 65471747 65471757 HOXA13 JASPAR yes 55508942
chr17 65471747 65471757 HOXB13 JASPAR yes 55508943
chr17 65471747 65471757 HOXD13 JASPAR yes 55508944
chr17 65471747 65471758 FOXH1 JASPAR yes 21279808
chr17 65471747 65471758 HOXA10 JASPAR yes 21279809
chr17 65471747 65471758 FOXH1 JASPAR yes 55508945
chr17 65471747 65471758 HOXA10 JASPAR yes 55508946
chr17 65471748 65471757 CDX1 JASPAR yes 21279810
chr17 65471748 65471757 CDX1 JASPAR yes 55508947
chr17 65471748 65471759 CDX2 JASPAR yes 21279811
chr17 65471748 65471759 CDX2 JASPAR yes 55508948
chr17 65471760 65471775 PRDM1 JASPAR yes 21279812
chr17 65471760 65471775 STAT2 JASPAR yes 21279813
chr17 65471760 65471775 PRDM1 JASPAR yes 55508949
chr17 65471760 65471775 STAT2 JASPAR yes 55508950
chr17 65471762 65471776 RXRB JASPAR yes 21279814
chr17 65471762 65471776 RXRG JASPAR yes 21279815
chr17 65471762 65471776 RXRB JASPAR yes 55508951
chr17 65471762 65471776 RXRG JASPAR yes 55508952
chr17 65471772 65471778 NFIC JASPAR yes 21279816
chr17 65471772 65471778 NFIC JASPAR yes 55508953
chr17 65471793 65471803 FIGLA JASPAR yes 21279817
chr17 65471793 65471803 TCF3 JASPAR yes 21279818
chr17 65471793 65471803 FIGLA JASPAR yes 55508954
chr17 65471793 65471803 TCF3 JASPAR yes 55508955
chr17 65471795 65471800 USF2 TRANSFAC yes 21279819
chr17 65471795 65471800 USF2 TRANSFAC yes 55508956
chr17 65471804 65471809 GATA2 JASPAR yes 21279820
chr17 65471804 65471809 GATA2 JASPAR yes 55508957
chr17 65471810 65471815 NFY TRANSFAC yes 21279821
chr17 65471810 65471815 NFY TRANSFAC yes 55508958
chr17 65471812 65471818 NFIC JASPAR yes 21279822
chr17 65471812 65471818 NFIC JASPAR yes 55508959
chr17 65471817 65471825 OTX2 JASPAR yes 21279823
chr17 65471817 65471825 OTX2 JASPAR yes 55508960
chr17 65471817 65471826 PITX3 JASPAR yes 21279824
chr17 65471817 65471826 PITX3 JASPAR yes 55508961
chr17 65471822 65471843 ZNF263 JASPAR yes 21279825
chr17 65471822 65471843 ZNF263 JASPAR yes 55508962
chr17 65471825 65471846 ZNF263 JASPAR yes 21279826
chr17 65471825 65471846 ZNF263 JASPAR yes 55508963
chr17 65471838 65471844 MAZ TRANSFAC yes 21279827
chr17 65471838 65471844 MAZ TRANSFAC yes 55508964
chr17 65471838 65471849 E2F6 JASPAR yes 21279828
chr17 65471838 65471849 E2F6 JASPAR yes 55508965
chr17 65471847 65471862 FOXA1 JASPAR yes 21279829
chr17 65471847 65471862 FOXA1 JASPAR yes 55508966
chr17 65471851 65471862 FOXA1 JASPAR yes 21279830
chr17 65471851 65471862 FOXA1 JASPAR yes 55508967
chr17 65471857 65471863 LEF1 TRANSFAC yes 21279831
chr17 65471857 65471863 SOX10 JASPAR yes 21279832
chr17 65471857 65471863 LEF1 TRANSFAC yes 55508968
chr17 65471857 65471863 SOX10 JASPAR yes 55508969
chr17 65471871 65471889 MAFF JASPAR yes 21279833
chr17 65471871 65471889 MAFF JASPAR yes 55508970
chr17 65471872 65471887 MAFK JASPAR yes 21279834
chr17 65471872 65471887 MAFK JASPAR yes 55508971
chr17 65471876 65471887 NRL JASPAR yes 21279835
chr17 65471876 65471887 NRL JASPAR yes 55508972
chr17 65471896 65471907 STAT1 JASPAR yes 21279836
chr17 65471896 65471907 STAT3 JASPAR yes 21279837
chr17 65471896 65471907 STAT1 JASPAR yes 55508973
chr17 65471896 65471907 STAT3 JASPAR yes 55508974
chr17 65471914 65471923 SRY JASPAR yes 21279838
chr17 65471914 65471923 SRY JASPAR yes 55508975
chr17 65471948 65471967 RFX2 JASPAR yes 21279839
chr17 65471948 65471967 RFX2 JASPAR yes 55508976
chr17 65471952 65471968 RFX2 JASPAR yes 21279840
chr17 65471952 65471968 RFX3 JASPAR yes 21279841
chr17 65471952 65471968 RFX5 JASPAR yes 21279842
chr17 65471952 65471968 RFX2 JASPAR yes 55508977
chr17 65471952 65471968 RFX3 JASPAR yes 55508978
chr17 65471952 65471968 RFX5 JASPAR yes 55508979
chr17 65471960 65471965 TFAP2A TRANSFAC yes 21279843
chr17 65471960 65471965 TFAP2A TRANSFAC yes 55508980
chr17 65471960 65471966 MZF1 JASPAR yes 21279844
chr17 65471960 65471966 MZF1 JASPAR yes 55508981
chr17 65471969 65471973 H1TF2 TRANSFAC yes 21279845
chr17 65471969 65471973 NFE TRANSFAC yes 21279846
chr17 65471969 65471973 SRF TRANSFAC yes 21279847
chr17 65471969 65471973 H1TF2 TRANSFAC yes 55508982
chr17 65471969 65471973 NFE TRANSFAC yes 55508983
chr17 65471969 65471973 SRF TRANSFAC yes 55508984
chr17 65471975 65471979 YY1 TRANSFAC yes 21279848
chr17 65471975 65471979 YY1 TRANSFAC yes 55508985
chr17 65471989 65471993 NFE TRANSFAC yes 21279849
chr17 65471989 65471993 NFE TRANSFAC yes 55508986
chr17 65472013 65472018 ETS2 TRANSFAC yes 21279850
chr17 65472013 65472018 ETS2 TRANSFAC yes 55508987
chr17 65472018 65472037 RFX2 JASPAR yes 21279851
chr17 65472018 65472037 RFX2 JASPAR yes 55508988
chr17 65472020 65472023 MYB TRANSFAC yes 21279852
chr17 65472020 65472023 MYB TRANSFAC yes 55508989
SNP sites on vista25644[chr17:65471645-65472025]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 65471821 rs529195107 A G
CTCF OTX2 PITX3 RAD21 SMC3
5005355
chr17 65471923 rs76604559 T G
SRY
5005356
Genes possibly regulated by vista25644[chr17:65471645-65472025]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 65373575 65693372 + PITPNC1 ENSG00000154217.10 65373575 0.77 1.0 16178 1930
Expression level of Genes
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miRNAs possibly regulated by vista25644[chr17:65471645-65472025]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results