EnhancerDB
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  3. rs76604559[chr17:65471923]
Enhancers that have rs76604559[chr17:65471923]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr17 65471645 65472025 vista25644
VISTA
Transcript factors that have rs76604559[chr17:65471923]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65471373 65472033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782249
chr17 65471373 65472033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285888
chr17 65471373 65472033 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285889
chr17 65471383 65471979 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782251
chr17 65471383 65471979 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285892
chr17 65471383 65471979 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285893
chr17 65471428 65472008 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108285896
chr17 65471428 65472008 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108285897
chr17 65471434 65471954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782253
chr17 65471434 65471954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285898
chr17 65471434 65471954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285899
chr17 65471577 65471933 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21782266
chr17 65471577 65471933 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108285930
chr17 65471728 65473681 TEF1 GTRD no Bone (Osteoblast) 21782278
chr17 65471728 65473681 TEF1 GTRD no Bone (Osteoblast) 108285951
chr17 65471914 65471923 SRY JASPAR yes 21279838
chr17 65471914 65471923 SRY JASPAR yes 55508975
Genes associated with rs76604559[chr17:65471923], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More