EnhancerDB
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  3. vista25680[chr17:66308597-66309089]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25680[chr17:66308597-66309089]
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Tissue distribution of vista25680
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Transcription factor that possibly regulate vista25680[chr17:66308597-66309089]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 66308730 66308986 FOXA1 UCSC Txn Factor no Conserved 108286816
chr17 66308785 66309015 FOSL2 UCSC Txn Factor no Conserved 108286826
chr17 66308822 66309084 CEBPB UCSC Txn Factor no Conserved 108286830
chr17 66308617 66308621 YY1 TRANSFAC yes 21281511
chr17 66308617 66308621 YY1 TRANSFAC yes 55567358
chr17 66308620 66308624 YY1 TRANSFAC yes 21281512
chr17 66308620 66308624 YY1 TRANSFAC yes 55567359
chr17 66308652 66308667 FOXP1 JASPAR yes 21281513
chr17 66308652 66308667 FOXP1 JASPAR yes 55567360
chr17 66308661 66308671 TFEC JASPAR yes 21281514
chr17 66308661 66308671 TFEC JASPAR yes 55567361
chr17 66308669 66308673 NFE TRANSFAC yes 21281515
chr17 66308669 66308673 NFE TRANSFAC yes 55567362
chr17 66308678 66308682 NFE TRANSFAC yes 21281516
chr17 66308678 66308682 NFE TRANSFAC yes 55567363
chr17 66308708 66308722 NR2F1 JASPAR yes 21281517
chr17 66308708 66308722 NR2F1 JASPAR yes 55567364
chr17 66308713 66308726 NR2F1 JASPAR yes 21281518
chr17 66308713 66308726 NR2F1 JASPAR yes 55567365
chr17 66308714 66308729 HNF4G JASPAR yes 21281519
chr17 66308714 66308729 HNF4G JASPAR yes 55567366
chr17 66308715 66308729 RXRB JASPAR yes 21281520
chr17 66308715 66308729 RXRB JASPAR yes 55567367
chr17 66308717 66308721 ESR1 TRANSFAC yes 21281521
chr17 66308717 66308721 ESR1 TRANSFAC yes 55567368
chr17 66308717 66308728 USF1 JASPAR yes 21281522
chr17 66308717 66308728 USF1 JASPAR yes 55567369
chr17 66308722 66308732 NFIA JASPAR yes 21281523
chr17 66308722 66308732 NFIA JASPAR yes 55567370
chr17 66308724 66308730 NFIC JASPAR yes 21281524
chr17 66308724 66308730 NFIC JASPAR yes 55567371
chr17 66308728 66308739 RUNX1 JASPAR yes 21281525
chr17 66308728 66308739 RUNX1 JASPAR yes 55567372
chr17 66308744 66308765 ZNF263 JASPAR yes 21281526
chr17 66308744 66308765 ZNF263 JASPAR yes 55567373
chr17 66308745 66308766 ZNF263 JASPAR yes 21281527
chr17 66308745 66308766 ZNF263 JASPAR yes 55567374
chr17 66308754 66308760 MZF1 JASPAR yes 21281528
chr17 66308754 66308760 MZF1 JASPAR yes 55567375
chr17 66308755 66308765 SP1 JASPAR yes 21281529
chr17 66308755 66308765 SP1 JASPAR yes 55567376
chr17 66308767 66308773 TCF4 TRANSFAC yes 21281530
chr17 66308767 66308773 TCF4 TRANSFAC yes 55567377
chr17 66308778 66308788 NFATC3 JASPAR yes 21281531
chr17 66308778 66308788 NFATC3 JASPAR yes 55567378
chr17 66308805 66308816 USF2 JASPAR yes 21281532
chr17 66308805 66308816 USF2 JASPAR yes 55567379
chr17 66308816 66308831 HNF4G JASPAR yes 21281533
chr17 66308816 66308831 HNF4G JASPAR yes 55567380
chr17 66308852 66308858 LEF1 TRANSFAC yes 21281534
chr17 66308852 66308858 SOX10 JASPAR yes 21281535
chr17 66308852 66308858 LEF1 TRANSFAC yes 55567381
chr17 66308852 66308858 SOX10 JASPAR yes 55567382
chr17 66308853 66308868 RFX5 JASPAR yes 21281536
chr17 66308853 66308868 RFX5 JASPAR yes 55567383
chr17 66308854 66308862 FOXO3 JASPAR yes 21281537
chr17 66308854 66308862 FOXO3 JASPAR yes 55567384
chr17 66308855 66308870 STAT1 JASPAR yes 21281538
chr17 66308855 66308870 STAT1 JASPAR yes 55567385
chr17 66308857 66308864 MEIS1 JASPAR yes 21281539
chr17 66308857 66308864 MEIS1 JASPAR yes 55567386
chr17 66308857 66308865 MEIS2 JASPAR yes 21281540
chr17 66308857 66308865 MEIS3 JASPAR yes 21281541
chr17 66308857 66308865 MEIS2 JASPAR yes 55567387
chr17 66308857 66308865 MEIS3 JASPAR yes 55567388
chr17 66308857 66308868 STAT1 JASPAR yes 21281542
chr17 66308857 66308868 STAT1 JASPAR yes 55567389
chr17 66308871 66308882 ELK4 JASPAR yes 21281543
chr17 66308871 66308882 FLI1 JASPAR yes 21281544
chr17 66308871 66308882 ELK4 JASPAR yes 55567390
chr17 66308871 66308882 FLI1 JASPAR yes 55567391
chr17 66308872 66308882 GABPA JASPAR yes 21281545
chr17 66308872 66308882 GABPA JASPAR yes 55567392
chr17 66308874 66308888 GLIS3 JASPAR yes 21281546
chr17 66308874 66308888 GLIS3 JASPAR yes 55567393
chr17 66308877 66308890 JUN JASPAR yes 21281547
chr17 66308877 66308890 JUN JASPAR yes 55567394
chr17 66308888 66308902 JUN JASPAR yes 21281548
chr17 66308888 66308902 JUN JASPAR yes 55567395
chr17 66308892 66308903 FOS JASPAR yes 21281549
chr17 66308892 66308903 JUND JASPAR yes 21281550
chr17 66308892 66308903 FOS JASPAR yes 55567396
chr17 66308892 66308903 JUND JASPAR yes 55567397
chr17 66308934 66308954 PPARG JASPAR yes 21281551
chr17 66308934 66308954 PPARG JASPAR yes 55567398
chr17 66308935 66308940 TFAP2A TRANSFAC yes 21281552
chr17 66308935 66308940 TFAP2A TRANSFAC yes 55567399
chr17 66308935 66308941 MZF1 JASPAR yes 21281553
chr17 66308935 66308941 MZF1 JASPAR yes 55567400
chr17 66308966 66308977 CEBPB JASPAR yes 21281554
chr17 66308966 66308977 CEBPB JASPAR yes 55567401
chr17 66308967 66308977 CEBPB JASPAR yes 21281555
chr17 66308967 66308977 CEBPE JASPAR yes 21281556
chr17 66308967 66308977 CEBPG JASPAR yes 21281557
chr17 66308967 66308977 CEBPB JASPAR yes 55567402
chr17 66308967 66308977 CEBPE JASPAR yes 55567403
chr17 66308967 66308977 CEBPG JASPAR yes 55567404
chr17 66308967 66308978 CEBPA JASPAR yes 21281558
chr17 66308967 66308978 CEBPA JASPAR yes 55567405
chr17 66308976 66308991 NR2C2 JASPAR yes 21281559
chr17 66308976 66308991 NR2C2 JASPAR yes 55567406
chr17 66308982 66308992 SREBF1 JASPAR yes 21281560
chr17 66308982 66308992 SREBF2 JASPAR yes 21281561
chr17 66308982 66308992 SREBF1 JASPAR yes 55567407
chr17 66308982 66308992 SREBF2 JASPAR yes 55567408
chr17 66309016 66309026 SP1 JASPAR yes 21281562
chr17 66309016 66309026 SP1 JASPAR yes 55567409
chr17 66309019 66309024 SP1 TRANSFAC yes 21281563
chr17 66309019 66309024 SP1 TRANSFAC yes 55567410
chr17 66309040 66309050 HOXB13 JASPAR yes 21281564
chr17 66309040 66309050 HOXB13 JASPAR yes 55567411
chr17 66309044 66309048 YY1 TRANSFAC yes 21281565
chr17 66309044 66309048 YY1 TRANSFAC yes 55567412
chr17 66309046 66309060 PAX6 JASPAR yes 21281566
chr17 66309046 66309060 PAX6 JASPAR yes 55567413
chr17 66309054 66309069 HSF1 JASPAR yes 21281567
chr17 66309054 66309069 HSF1 JASPAR yes 55567414
chr17 66309055 66309068 HSF1 JASPAR yes 21281568
chr17 66309055 66309068 HSF2 JASPAR yes 21281569
chr17 66309055 66309068 HSF4 JASPAR yes 21281570
chr17 66309055 66309068 HSF1 JASPAR yes 55567415
chr17 66309055 66309068 HSF2 JASPAR yes 55567416
chr17 66309055 66309068 HSF4 JASPAR yes 55567417
SNP sites on vista25680[chr17:66308597-66309089]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 66308601 rs142069896 C T no 5011982
chr17 66308655 rs575824202 T C
FOXP1
5011983
chr17 66308658 rs182466780 T A
FOXP1
5011984
chr17 66308708 rs7216378 A G
NR2F1
5011985
chr17 66308709 rs7212807 G C
NR2F1
5011986
chr17 66308727 rs541079893 C T
HNF4G NFIA NFIC RXRB USF1
5011987
chr17 66308741 rs559179605 T C
FOXA1
5011988
chr17 66308748 rs7208861 C T
FOXA1 ZNF263
5011989
chr17 66308836 rs7212967 G C
CEBPB FOSL2 FOXA1
5011990
chr17 66308929 rs138391343 C T
CEBPB FOSL2 FOXA1
5011991
chr17 66308930 rs117977010 G A
CEBPB FOSL2 FOXA1
5011992
chr17 66309042 rs7225644 T C
CEBPB HOXB13
5011993
Genes possibly regulated by vista25680[chr17:66308597-66309089]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 66243715 66253297 + AMZ2 ENSG00000196704.7 66243715 0.78 0.99 16183 35118
chr17 66255323 66418872 + ARSG ENSG00000141337.8 66255323 0.68 1.0 16184 46726
chr17 66263167 66287408 - SLC16A6 ENSG00000108932.7 66287408 0.82 0.97 16185 78811
Expression level of Genes
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miRNAs possibly regulated by vista25680[chr17:66308597-66309089]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results