EnhancerDB
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  3. rs541079893[chr17:66308727]
Enhancers that have rs541079893[chr17:66308727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 66304425 66317755 enh4558
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
chr17 66308597 66309089 vista25680
VISTA
Transcript factors that have rs541079893[chr17:66308727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 66308373 66308893 ZNF143 GTRD no Epithelial (MCF-7) 21782751
chr17 66308373 66308893 ZNF143 GTRD no Epithelial (MCF-7) 108286804
chr17 66308586 66309130 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21782752
chr17 66308586 66309130 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108286805
chr17 66308620 66309076 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21782753
chr17 66308620 66309076 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108286806
chr17 66308623 66309127 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782754
chr17 66308623 66309127 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108286807
chr17 66308632 66309028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782755
chr17 66308632 66309028 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108286808
chr17 66308675 66309102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782756
chr17 66308675 66309102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108286809
chr17 66308676 66309076 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21782757
chr17 66308676 66309076 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108286810
chr17 66308712 66309082 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782758
chr17 66308712 66309082 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108286811
chr17 66308714 66308729 HNF4G JASPAR yes 21281519
chr17 66308714 66308729 HNF4G JASPAR yes 55567366
chr17 66308715 66308729 RXRB JASPAR yes 21281520
chr17 66308715 66308729 RXRB JASPAR yes 55567367
chr17 66308715 66309051 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21782759
chr17 66308715 66309051 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108286812
chr17 66308717 66308728 USF1 JASPAR yes 21281522
chr17 66308717 66308728 USF1 JASPAR yes 55567369
chr17 66308718 66309074 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21782760
chr17 66308718 66309074 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108286813
chr17 66308722 66308732 NFIA JASPAR yes 21281523
chr17 66308722 66308732 NFIA JASPAR yes 55567370
chr17 66308724 66308730 NFIC JASPAR yes 21281524
chr17 66308724 66308730 NFIC JASPAR yes 55567371
chr17 66308726 66308986 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21782761
chr17 66308726 66308986 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108286814
Genes associated with rs541079893[chr17:66308727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More