EnhancerDB
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  3. vista26328[chr17:78471918-78472124]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26328[chr17:78471918-78472124]
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Tissue distribution of vista26328
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Transcription factor that possibly regulate vista26328[chr17:78471918-78472124]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 78471904 78471925 MAFG JASPAR yes 21314733
chr17 78471904 78471925 MAFG JASPAR yes 56248047
chr17 78471949 78471960 NFE2L2 JASPAR yes 21314734
chr17 78471949 78471960 NFE2L2 JASPAR yes 56248049
chr17 78471952 78471958 ATF1 TRANSFAC yes 21314735
chr17 78471952 78471958 ATF1 TRANSFAC yes 56248050
chr17 78471980 78471985 MYC TRANSFAC yes 21314736
chr17 78471980 78471985 MYC TRANSFAC yes 56248051
chr17 78472012 78472026 ZIC1 JASPAR yes 21314737
chr17 78472012 78472026 ZIC1 JASPAR yes 56248052
chr17 78472026 78472030 H4TF2 TRANSFAC yes 21314738
chr17 78472026 78472030 H4TF2 TRANSFAC yes 56248053
chr17 78472038 78472042 YY1 TRANSFAC yes 21314739
chr17 78472038 78472042 YY1 TRANSFAC yes 56248054
chr17 78472041 78472044 MYB TRANSFAC yes 21314740
chr17 78472041 78472044 MYB TRANSFAC yes 56248055
chr17 78472041 78472055 NR2F1 JASPAR yes 21314741
chr17 78472041 78472055 RXRB JASPAR yes 21314742
chr17 78472041 78472055 RXRG JASPAR yes 21314743
chr17 78472041 78472055 NR2F1 JASPAR yes 56248056
chr17 78472041 78472055 RXRB JASPAR yes 56248057
chr17 78472041 78472055 RXRG JASPAR yes 56248058
chr17 78472063 78472068 GATA1 TRANSFAC yes 21314744
chr17 78472063 78472068 GATA1 TRANSFAC yes 56248059
chr17 78472068 78472086 E2F3 JASPAR yes 21314745
chr17 78472068 78472086 E2F3 JASPAR yes 56248060
chr17 78472069 78472084 ZBTB33 JASPAR yes 21314746
chr17 78472069 78472084 ZBTB33 JASPAR yes 56248061
chr17 78472100 78472105 TFAP2A TRANSFAC yes 21314747
chr17 78472100 78472105 TFAP2A TRANSFAC yes 56248062
chr17 78472100 78472106 MZF1 JASPAR yes 21314748
chr17 78472100 78472106 MZF1 JASPAR yes 56248063
chr17 78472120 78472132 POU2F1 JASPAR yes 21314749
chr17 78472120 78472132 POU2F1 JASPAR yes 56248064
chr17 78472120 78472133 POU3F3 JASPAR yes 21314750
chr17 78472120 78472133 POU3F3 JASPAR yes 56248065
chr17 78472120 78472134 POU1F1 JASPAR yes 21314751
chr17 78472120 78472134 POU1F1 JASPAR yes 56248066
chr17 78472121 78472133 POU3F1 JASPAR yes 21314752
chr17 78472121 78472133 POU3F2 JASPAR yes 21314753
chr17 78472121 78472133 POU3F1 JASPAR yes 56248067
chr17 78472121 78472133 POU3F2 JASPAR yes 56248068
chr17 78472121 78472134 POU2F2 JASPAR yes 21314754
chr17 78472121 78472134 POU2F2 JASPAR yes 56248069
chr17 78472122 78472131 POU3F4 JASPAR yes 21314755
chr17 78472122 78472131 POU5F1B JASPAR yes 21314756
chr17 78472122 78472131 POU3F4 JASPAR yes 56248070
chr17 78472122 78472131 POU5F1B JASPAR yes 56248071
chr17 78472124 78472130 TCF4 TRANSFAC yes 21314757
chr17 78472124 78472130 TCF4 TRANSFAC yes 56248072
SNP sites on vista26328[chr17:78471918-78472124]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 78471957 rs117558158 T C
ATF1 NFE2L2
5102174
chr17 78471971 rs73445465 G A no 5102175
chr17 78471984 rs112558373 C T
MYC
5102176
chr17 78472013 rs552042197 G A
ZIC1
5102177
Genes possibly regulated by vista26328[chr17:78471918-78472124]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78388965 78411886 + ENDOV ENSG00000173818.12 78388965 0.83 1.0 16337 17047
chr17 78440948 78451643 - NPTX1 ENSG00000171246.5 78451643 0.95 0.98 16338 79725
chr17 78518619 78940171 + RPTOR ENSG00000141564.9 78518619 0.64 1.0 16339 53505
Expression level of Genes
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miRNAs possibly regulated by vista26328[chr17:78471918-78472124]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results