EnhancerDB
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  3. rs552042197[chr17:78472013]
Enhancers that have rs552042197[chr17:78472013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78469656 78481421 enh32370
Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Muscle (Myotube) Uterus
chr17 78471918 78472124 vista26328
VISTA
Transcript factors that have rs552042197[chr17:78472013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78471145 78473290 ZNF274 GTRD no Blood (GM12878) 108307086
chr17 78471158 78472486 ZNF143 GTRD no Epithelial (MCF-7) 108307087
chr17 78471193 78473077 TCF7L2 GTRD no Colon (HCT116) 108307088
chr17 78471485 78472993 ZNF143 GTRD no Epithelial (MCF-7) 108307089
chr17 78471490 78473365 ZNF274 GTRD no Blood (GM12878) 108307090
chr17 78471499 78473081 TCF7L2 GTRD no Colon (HCT116) 108307091
chr17 78471540 78472459 TCF7L2 GTRD no Colon (HCT116) 108307092
chr17 78471676 78472891 TCF7L2 GTRD no Colon (HCT116) 108307094
chr17 78471841 78473391 ZNF274 GTRD no Blood (GM12878) 108307096
chr17 78471887 78473432 ZNF274 GTRD no Blood (GM12878) 108307097
chr17 78471940 78472190 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108307098
chr17 78471963 78472383 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108307099
chr17 78471971 78473144 ZNF274 GTRD no Blood (GM12878) 108307100
chr17 78471985 78472361 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108307101
chr17 78471999 78473325 ZNF274 GTRD no Blood (GM12878) 108307102
chr17 78472012 78472026 ZIC1 JASPAR yes 21314737
chr17 78472012 78472026 ZIC1 JASPAR yes 56248052
chr17 78472013 78472289 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108307103
Genes associated with rs552042197[chr17:78472013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More