EnhancerDB
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  3. vista26380[chr17:79066626-79066874]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26380[chr17:79066626-79066874]
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Tissue distribution of vista26380
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Transcription factor that possibly regulate vista26380[chr17:79066626-79066874]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 79066616 79066626 SP1 JASPAR yes 21317122
chr17 79066616 79066626 SP1 JASPAR yes 56305266
chr17 79066616 79066636 ESR1 JASPAR yes 21317123
chr17 79066616 79066636 ESR1 JASPAR yes 56305267
chr17 79066624 79066644 TP53 JASPAR yes 21317124
chr17 79066624 79066644 TP53 JASPAR yes 56305269
chr17 79066626 79066646 TP63 JASPAR yes 21317125
chr17 79066626 79066646 TP63 JASPAR yes 56305270
chr17 79066627 79066645 TP53 JASPAR yes 21317126
chr17 79066627 79066645 TP63 JASPAR yes 21317127
chr17 79066627 79066645 TP53 JASPAR yes 56305271
chr17 79066627 79066645 TP63 JASPAR yes 56305272
chr17 79066635 79066645 SP1 JASPAR yes 21317128
chr17 79066635 79066645 SP1 JASPAR yes 56305273
chr17 79066636 79066640 LFA1 TRANSFAC yes 21317129
chr17 79066636 79066640 LFA1 TRANSFAC yes 56305274
chr17 79066649 79066664 RUNX2 JASPAR yes 21317130
chr17 79066649 79066664 RUNX2 JASPAR yes 56305275
chr17 79066678 79066688 SP1 JASPAR yes 21317131
chr17 79066678 79066688 SP1 JASPAR yes 56305276
chr17 79066685 79066689 ESR1 TRANSFAC yes 21317132
chr17 79066685 79066689 ESR1 TRANSFAC yes 56305277
chr17 79066696 79066700 H4TF2 TRANSFAC yes 21317133
chr17 79066696 79066700 H4TF2 TRANSFAC yes 56305278
chr17 79066757 79066772 HNF4A JASPAR yes 21317134
chr17 79066757 79066772 HNF4A JASPAR yes 56305279
chr17 79066766 79066781 AR JASPAR yes 21317135
chr17 79066766 79066781 AR JASPAR yes 56305280
chr17 79066775 79066784 HIC2 JASPAR yes 21317136
chr17 79066775 79066784 HIC2 JASPAR yes 56305281
chr17 79066779 79066798 CTCF JASPAR yes 21317137
chr17 79066779 79066798 CTCF JASPAR yes 56305282
chr17 79066787 79066802 NR2C2 JASPAR yes 21317138
chr17 79066787 79066802 NR2C2 JASPAR yes 56305283
chr17 79066788 79066798 SP1 JASPAR yes 21317139
chr17 79066788 79066798 SP1 JASPAR yes 56305284
chr17 79066789 79066799 SP1 JASPAR yes 21317140
chr17 79066789 79066799 SP1 JASPAR yes 56305285
chr17 79066790 79066794 LFA1 TRANSFAC yes 21317141
chr17 79066790 79066794 LFA1 TRANSFAC yes 56305286
chr17 79066804 79066813 TFAP2A JASPAR yes 21317142
chr17 79066804 79066813 TFAP2A JASPAR yes 56305287
chr17 79066810 79066820 HEY2 JASPAR yes 21317143
chr17 79066810 79066820 HEY2 JASPAR yes 56305288
chr17 79066819 79066839 TP63 JASPAR yes 21317144
chr17 79066819 79066839 TP63 JASPAR yes 56305289
chr17 79066821 79066836 TP53 JASPAR yes 21317145
chr17 79066821 79066836 TP53 JASPAR yes 56305290
chr17 79066847 79066862 NR2C2 JASPAR yes 21317146
chr17 79066847 79066862 NR2C2 JASPAR yes 56305291
chr17 79066849 79066860 E2F6 JASPAR yes 21317147
chr17 79066849 79066860 E2F6 JASPAR yes 56305292
chr17 79066850 79066855 SP1 TRANSFAC yes 21317148
chr17 79066850 79066855 SP1 TRANSFAC yes 56305293
SNP sites on vista26380[chr17:79066626-79066874]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 79066677 rs551831647 G A no 5110004
chr17 79066709 rs112748876 C T no 5110005
chr17 79066789 rs369095819 G A
CTCF NR2C2 SP1
5110006
chr17 79066839 rs12937176 T G
TP63
5110007
chr17 79066858 rs558258066 G A
E2F6 NR2C2
5110008
Genes possibly regulated by vista26380[chr17:79066626-79066874]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78977135 78978932 + AC127496.1 ENSG00000175911.4 78977135 0.71 1.0 16341 10509
chr17 79008948 79091232 + BAIAP2 ENSG00000175866.11 79008948 0.75 1.0 16342 42322
chr17 79091095 79139877 - AATK ENSG00000181409.7 79139877 0.83 1.0 16343 26997
Expression level of Genes
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miRNAs possibly regulated by vista26380[chr17:79066626-79066874]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results