EnhancerDB
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  3. rs558258066[chr17:79066858]
Enhancers that have rs558258066[chr17:79066858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79058967 79071355 enh17435
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 79066626 79066874 vista26380
VISTA
Transcript factors that have rs558258066[chr17:79066858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79066589 79067100 TCF7L2 GTRD no Colon (HCT116) 21797644
chr17 79066589 79067100 TCF7L2 GTRD no Colon (HCT116) 108308624
chr17 79066847 79066862 NR2C2 JASPAR yes 21317146
chr17 79066847 79066862 NR2C2 JASPAR yes 56305291
chr17 79066849 79066860 E2F6 JASPAR yes 21317147
chr17 79066849 79066860 E2F6 JASPAR yes 56305292
Genes associated with rs558258066[chr17:79066858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More