EnhancerDB
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  3. vista26456[chr17:80239829-80239997]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26456[chr17:80239829-80239997]
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Tissue distribution of vista26456
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Transcription factor that possibly regulate vista26456[chr17:80239829-80239997]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 80239877 80239888 FOSL2 JASPAR yes 21321657
chr17 80239877 80239888 JUNB JASPAR yes 21321658
chr17 80239877 80239888 FOSL2 JASPAR yes 56357129
chr17 80239877 80239888 JUNB JASPAR yes 56357130
chr17 80239878 80239889 FOSL1 JASPAR yes 21321659
chr17 80239878 80239889 JUND JASPAR yes 21321660
chr17 80239878 80239889 FOSL1 JASPAR yes 56357131
chr17 80239878 80239889 JUND JASPAR yes 56357132
chr17 80239879 80239886 JUN TRANSFAC yes 21321661
chr17 80239879 80239886 JUN TRANSFAC yes 56357133
chr17 80239882 80239892 EN2 JASPAR yes 21321662
chr17 80239882 80239892 ESX1 JASPAR yes 21321663
chr17 80239882 80239892 GBX1 JASPAR yes 21321664
chr17 80239882 80239892 GBX2 JASPAR yes 21321665
chr17 80239882 80239892 GSX1 JASPAR yes 21321666
chr17 80239882 80239892 LBX2 JASPAR yes 21321667
chr17 80239882 80239892 LHX2 JASPAR yes 21321668
chr17 80239882 80239892 EN2 JASPAR yes 56357134
chr17 80239882 80239892 ESX1 JASPAR yes 56357135
chr17 80239882 80239892 GBX1 JASPAR yes 56357136
chr17 80239882 80239892 GBX2 JASPAR yes 56357137
chr17 80239882 80239892 GSX1 JASPAR yes 56357138
chr17 80239882 80239892 LBX2 JASPAR yes 56357139
chr17 80239882 80239892 LHX2 JASPAR yes 56357140
chr17 80239883 80239891 BARX1 JASPAR yes 21321669
chr17 80239883 80239891 BSX JASPAR yes 21321670
chr17 80239883 80239891 EN1 JASPAR yes 21321671
chr17 80239883 80239891 ISX JASPAR yes 21321672
chr17 80239883 80239891 LHX9 JASPAR yes 21321673
chr17 80239883 80239891 MSX1 JASPAR yes 21321674
chr17 80239883 80239891 MSX2 JASPAR yes 21321675
chr17 80239883 80239891 PRRX1 JASPAR yes 21321676
chr17 80239883 80239891 RAX2 JASPAR yes 21321677
chr17 80239883 80239891 SHOX JASPAR yes 21321678
chr17 80239883 80239891 BARX1 JASPAR yes 56357141
chr17 80239883 80239891 BSX JASPAR yes 56357142
chr17 80239883 80239891 EN1 JASPAR yes 56357143
chr17 80239883 80239891 ISX JASPAR yes 56357144
chr17 80239883 80239891 LHX9 JASPAR yes 56357145
chr17 80239883 80239891 MSX1 JASPAR yes 56357146
chr17 80239883 80239891 MSX2 JASPAR yes 56357147
chr17 80239883 80239891 PRRX1 JASPAR yes 56357148
chr17 80239883 80239891 RAX2 JASPAR yes 56357149
chr17 80239883 80239891 SHOX JASPAR yes 56357150
chr17 80239889 80239893 LFA1 TRANSFAC yes 21321679
chr17 80239889 80239893 LFA1 TRANSFAC yes 56357151
chr17 80239904 80239913 HIC2 JASPAR yes 21321680
chr17 80239904 80239913 HIC2 JASPAR yes 56357152
chr17 80239907 80239917 SP1 JASPAR yes 21321681
chr17 80239907 80239917 SP1 JASPAR yes 56357153
chr17 80239918 80239925 ETS1 TRANSFAC yes 21321682
chr17 80239918 80239925 ETS1 TRANSFAC yes 56357154
chr17 80239919 80239927 EHF JASPAR yes 21321683
chr17 80239919 80239927 EHF JASPAR yes 56357155
chr17 80239923 80239928 ETS2 TRANSFAC yes 21321684
chr17 80239923 80239928 ETS2 TRANSFAC yes 56357156
chr17 80239924 80239937 ELF1 JASPAR yes 21321685
chr17 80239924 80239937 ELF1 JASPAR yes 56357157
chr17 80239926 80239937 ETV2 JASPAR yes 21321686
chr17 80239926 80239937 ETV2 JASPAR yes 56357158
chr17 80239927 80239937 ELK1 JASPAR yes 21321687
chr17 80239927 80239937 ELK3 JASPAR yes 21321688
chr17 80239927 80239937 ERF JASPAR yes 21321689
chr17 80239927 80239937 ERG JASPAR yes 21321690
chr17 80239927 80239937 ETS1 JASPAR yes 21321691
chr17 80239927 80239937 ETV1 JASPAR yes 21321692
chr17 80239927 80239937 ETV3 JASPAR yes 21321693
chr17 80239927 80239937 ETV4 JASPAR yes 21321694
chr17 80239927 80239937 ETV5 JASPAR yes 21321695
chr17 80239927 80239937 ETV6 JASPAR yes 21321696
chr17 80239927 80239937 FEV JASPAR yes 21321697
chr17 80239927 80239937 FLI1 JASPAR yes 21321698
chr17 80239927 80239937 GABPA JASPAR yes 21321699
chr17 80239927 80239937 ELK1 JASPAR yes 56357159
chr17 80239927 80239937 ELK3 JASPAR yes 56357160
chr17 80239927 80239937 ERF JASPAR yes 56357161
chr17 80239927 80239937 ERG JASPAR yes 56357162
chr17 80239927 80239937 ETS1 JASPAR yes 56357163
chr17 80239927 80239937 ETV1 JASPAR yes 56357164
chr17 80239927 80239937 ETV3 JASPAR yes 56357165
chr17 80239927 80239937 ETV4 JASPAR yes 56357166
chr17 80239927 80239937 ETV5 JASPAR yes 56357167
chr17 80239927 80239937 ETV6 JASPAR yes 56357168
chr17 80239927 80239937 FEV JASPAR yes 56357169
chr17 80239927 80239937 FLI1 JASPAR yes 56357170
chr17 80239927 80239937 GABPA JASPAR yes 56357171
chr17 80239927 80239938 ELK4 JASPAR yes 21321700
chr17 80239927 80239938 FLI1 JASPAR yes 21321701
chr17 80239927 80239938 ELK4 JASPAR yes 56357172
chr17 80239927 80239938 FLI1 JASPAR yes 56357173
chr17 80239929 80239935 ETS1 JASPAR yes 21321702
chr17 80239929 80239935 SPI1 JASPAR yes 21321703
chr17 80239929 80239935 ETS1 JASPAR yes 56357174
chr17 80239929 80239935 SPI1 JASPAR yes 56357175
chr17 80239945 80239953 TBX15 JASPAR yes 21321704
chr17 80239945 80239953 TBX15 JASPAR yes 56357176
chr17 80239948 80239962 GLIS2 JASPAR yes 21321705
chr17 80239948 80239962 GLIS3 JASPAR yes 21321706
chr17 80239948 80239962 GLIS2 JASPAR yes 56357177
chr17 80239948 80239962 GLIS3 JASPAR yes 56357178
chr17 80239962 80239965 MYB TRANSFAC yes 21321707
chr17 80239962 80239965 MYB TRANSFAC yes 56357179
SNP sites on vista26456[chr17:80239829-80239997]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 80239874 rs75809987 G A no 5120415
chr17 80239890 rs116227750 G T
BARX1 BSX EN1 EN2 ESX1 GBX1 GBX2 GSX1 ISX LBX2 LFA1 LHX2 LHX9 MSX1 MSX2 PRRX1 RAX2 SHOX
5120416
chr17 80239930 rs568484118 C T
ELF1 ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV5 ETV6 FEV FLI1 GABPA SPI1
5120417
chr17 80239988 rs111315711 A T no 5120418
Genes possibly regulated by vista26456[chr17:80239829-80239997]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 80059336 80170706 - CCDC57 ENSG00000176155.14 80170706 0.76 1.0 16387 30877
chr17 80186273 80219005 + SLC16A3 ENSG00000141526.10 80186273 0.75 1.0 16388 46444
chr17 80196899 80231607 - CSNK1D ENSG00000141551.10 80231607 0.62 1.0 16389 91778
chr17 80214131 80216080 + AC132872.2 ENSG00000268852.1 80214131 0.78 0.99 16390 74302
chr17 80272744 80275478 - CD7 ENSG00000173762.3 80275478 0.96 0.95 16391 64519
chr17 80278900 80291950 - SECTM1 ENSG00000141574.3 80291950 0.88 0.99 16392 48047
chr17 80317123 80321652 + TEX19 ENSG00000182459.4 80317123 0.95 1.0 16393 22874
chr17 80332153 80333462 + UTS2R ENSG00000181408.2 80332153 0.91 1.0 16394 7844
Expression level of Genes
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miRNAs possibly regulated by vista26456[chr17:80239829-80239997]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results