EnhancerDB
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  3. vista27491[chr18:51788362-51788737]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27491[chr18:51788362-51788737]
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Tissue distribution of vista27491
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Transcription factor that possibly regulate vista27491[chr18:51788362-51788737]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 51788356 51788371 RUNX2 JASPAR yes 42710250
chr18 51788356 51788371 RUNX2 JASPAR yes 110713270
chr18 51788363 51788373 SP1 JASPAR yes 42710251
chr18 51788363 51788373 SP1 JASPAR yes 110713271
chr18 51788370 51788384 PLAG1 JASPAR yes 42710252
chr18 51788370 51788384 PLAG1 JASPAR yes 110713272
chr18 51788377 51788387 SP1 JASPAR yes 42710253
chr18 51788377 51788387 SP1 JASPAR yes 110713273
chr18 51788380 51788385 SP1 TRANSFAC yes 42710254
chr18 51788380 51788385 SP1 TRANSFAC yes 110713274
chr18 51788431 51788435 YY1 TRANSFAC yes 42710255
chr18 51788431 51788435 YY1 TRANSFAC yes 110713275
chr18 51788455 51788465 TFEC JASPAR yes 42710256
chr18 51788455 51788465 TFEC JASPAR yes 110713276
chr18 51788458 51788467 JDP2 JASPAR yes 42710257
chr18 51788458 51788467 JDP2 JASPAR yes 110713277
chr18 51788461 51788476 AR JASPAR yes 42710258
chr18 51788461 51788476 AR JASPAR yes 110713278
chr18 51788472 51788483 HOXC13 JASPAR yes 42710259
chr18 51788472 51788483 HOXC13 JASPAR yes 110713279
chr18 51788502 51788522 PPARG JASPAR yes 42710260
chr18 51788502 51788522 PPARG JASPAR yes 110713280
chr18 51788507 51788521 STAT1 JASPAR yes 42710261
chr18 51788507 51788521 STAT1 JASPAR yes 110713281
chr18 51788507 51788522 STAT2 JASPAR yes 42710262
chr18 51788507 51788522 STAT2 JASPAR yes 110713282
chr18 51788523 51788534 NFIL3 JASPAR yes 42710263
chr18 51788523 51788534 NFIL3 JASPAR yes 110713283
chr18 51788524 51788545 IRF1 JASPAR yes 42710264
chr18 51788524 51788545 IRF1 JASPAR yes 110713284
chr18 51788530 51788551 IRF1 JASPAR yes 42710265
chr18 51788530 51788551 IRF1 JASPAR yes 110713285
chr18 51788532 51788547 IRF9 JASPAR yes 42710266
chr18 51788532 51788547 IRF9 JASPAR yes 110713286
chr18 51788533 51788547 IRF7 JASPAR yes 42710267
chr18 51788533 51788547 IRF7 JASPAR yes 110713287
chr18 51788534 51788552 IRF2 JASPAR yes 42710268
chr18 51788534 51788552 IRF2 JASPAR yes 110713288
chr18 51788547 51788560 POU3F3 JASPAR yes 42710269
chr18 51788547 51788560 POU3F3 JASPAR yes 110713289
chr18 51788548 51788560 POU2F1 JASPAR yes 42710270
chr18 51788548 51788560 POU2F1 JASPAR yes 110713290
chr18 51788549 51788558 POU3F4 JASPAR yes 42710271
chr18 51788549 51788558 POU5F1B JASPAR yes 42710272
chr18 51788549 51788558 POU3F4 JASPAR yes 110713291
chr18 51788549 51788558 POU5F1B JASPAR yes 110713292
chr18 51788551 51788554 MYB TRANSFAC yes 42710273
chr18 51788551 51788554 MYB TRANSFAC yes 110713293
chr18 51788556 51788574 ESR1 JASPAR yes 42710274
chr18 51788556 51788574 ESR1 JASPAR yes 110713294
chr18 51788562 51788577 AR JASPAR yes 42710275
chr18 51788562 51788577 AR JASPAR yes 110713295
chr18 51788591 51788594 MYB TRANSFAC yes 42710276
chr18 51788591 51788594 MYB TRANSFAC yes 110713296
chr18 51788597 51788608 PHOX2A JASPAR yes 42710277
chr18 51788597 51788608 PROP1 JASPAR yes 42710278
chr18 51788597 51788608 PHOX2A JASPAR yes 110713297
chr18 51788597 51788608 PROP1 JASPAR yes 110713298
chr18 51788610 51788617 NKX3-1 JASPAR yes 42710279
chr18 51788610 51788617 NKX3-1 JASPAR yes 110713299
chr18 51788611 51788625 SPI1 JASPAR yes 42710280
chr18 51788611 51788625 SPI1 JASPAR yes 110713300
chr18 51788616 51788637 IRF1 JASPAR yes 42710281
chr18 51788616 51788637 IRF1 JASPAR yes 110713301
chr18 51788619 51788623 YY1 TRANSFAC yes 42710282
chr18 51788619 51788623 YY1 TRANSFAC yes 110713302
chr18 51788622 51788637 FOXA1 JASPAR yes 42710283
chr18 51788622 51788637 FOXA1 JASPAR yes 110713303
chr18 51788623 51788629 TCF4 TRANSFAC yes 42710284
chr18 51788623 51788629 TCF4 TRANSFAC yes 110713304
chr18 51788623 51788635 FOXI1 JASPAR yes 42710285
chr18 51788623 51788635 FOXI1 JASPAR yes 110713305
chr18 51788623 51788638 FOXP1 JASPAR yes 42710286
chr18 51788623 51788638 FOXP1 JASPAR yes 110713306
chr18 51788624 51788636 FOXC2 JASPAR yes 42710287
chr18 51788624 51788636 FOXC2 JASPAR yes 110713307
chr18 51788626 51788637 FOXA1 JASPAR yes 42710288
chr18 51788626 51788637 FOXA1 JASPAR yes 110713308
chr18 51788627 51788642 MEF2C JASPAR yes 42710289
chr18 51788627 51788642 MEF2C JASPAR yes 110713309
chr18 51788631 51788642 STAT3 JASPAR yes 42710290
chr18 51788631 51788642 STAT3 JASPAR yes 110713310
chr18 51788636 51788643 NFATC2 JASPAR yes 42710291
chr18 51788636 51788643 NFATC2 JASPAR yes 110713311
chr18 51788636 51788653 NR3C1 JASPAR yes 42710292
chr18 51788636 51788653 NR3C1 JASPAR yes 110713312
chr18 51788637 51788645 FOXO3 JASPAR yes 42710293
chr18 51788637 51788645 FOXO3 JASPAR yes 110713313
chr18 51788638 51788647 SRY JASPAR yes 42710294
chr18 51788638 51788647 SRY JASPAR yes 110713314
chr18 51788656 51788674 SRF JASPAR yes 42710295
chr18 51788656 51788674 SRF JASPAR yes 110713315
chr18 51788675 51788685 SREBF1 JASPAR yes 42710296
chr18 51788675 51788685 SREBF2 JASPAR yes 42710297
chr18 51788675 51788685 SREBF1 JASPAR yes 110713316
chr18 51788675 51788685 SREBF2 JASPAR yes 110713317
chr18 51788675 51788689 MTF1 JASPAR yes 42710298
chr18 51788675 51788689 MTF1 JASPAR yes 110713318
chr18 51788724 51788735 E2F6 JASPAR yes 42710299
chr18 51788724 51788735 E2F6 JASPAR yes 110713319
chr18 51788725 51788746 ZNF263 JASPAR yes 42710300
chr18 51788725 51788746 ZNF263 JASPAR yes 110713320
chr18 51788727 51788735 TBX15 JASPAR yes 42710301
chr18 51788727 51788735 TBX15 JASPAR yes 110713321
SNP sites on vista27491[chr18:51788362-51788737]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 51788392 rs563364175 T C no 5263656
chr18 51788621 rs148924994 A T
IRF1 SPI1 YY1
5263657
chr18 51788628 rs113859887 G A,C,T
FOXA1 FOXC2 FOXI1 FOXP1 IRF1 MEF2C TCF4
5263658
Genes possibly regulated by vista27491[chr18:51788362-51788737]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 51679079 51751158 - MBD2 ENSG00000134046.7 51751158 0.75 1.0 16595 62796
chr18 51795774 51847636 + POLI ENSG00000101751.6 51795774 0.79 0.99 16596 92963
chr18 51850728 51884334 - STARD6 ENSG00000174448.4 51884334 0.94 1.0 16597 4403
chr18 51884287 51911588 + C18orf54 ENSG00000166845.9 51884287 0.78 0.98 16598 4450
Expression level of Genes
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miRNAs possibly regulated by vista27491[chr18:51788362-51788737]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results