EnhancerDB
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  3. rs113859887[chr18:51788628]
Enhancers that have rs113859887[chr18:51788628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51771109 51790535 enh4844
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr18 51788362 51788737 vista27491
VISTA
Transcript factors that have rs113859887[chr18:51788628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51788123 51788783 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822949
chr18 51788123 51788783 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337185
chr18 51788155 51788751 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822950
chr18 51788155 51788751 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337186
chr18 51788286 51788655 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822951
chr18 51788286 51788655 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337188
chr18 51788293 51788649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822952
chr18 51788293 51788649 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337189
chr18 51788311 51788631 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822955
chr18 51788311 51788631 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337192
chr18 51788325 51788709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21822957
chr18 51788325 51788709 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108337194
chr18 51788616 51788637 IRF1 JASPAR yes 42710281
chr18 51788616 51788637 IRF1 JASPAR yes 110713301
chr18 51788622 51788637 FOXA1 JASPAR yes 42710283
chr18 51788622 51788637 FOXA1 JASPAR yes 110713303
chr18 51788623 51788629 TCF4 TRANSFAC yes 42710284
chr18 51788623 51788629 TCF4 TRANSFAC yes 110713304
chr18 51788623 51788635 FOXI1 JASPAR yes 42710285
chr18 51788623 51788635 FOXI1 JASPAR yes 110713305
chr18 51788623 51788638 FOXP1 JASPAR yes 42710286
chr18 51788623 51788638 FOXP1 JASPAR yes 110713306
chr18 51788624 51788636 FOXC2 JASPAR yes 42710287
chr18 51788624 51788636 FOXC2 JASPAR yes 110713307
chr18 51788626 51788637 FOXA1 JASPAR yes 42710288
chr18 51788626 51788637 FOXA1 JASPAR yes 110713308
chr18 51788627 51788642 MEF2C JASPAR yes 42710289
chr18 51788627 51788642 MEF2C JASPAR yes 110713309
Genes associated with rs113859887[chr18:51788628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More