EnhancerDB
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  3. vista27568[chr18:55480522-55480777]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27568[chr18:55480522-55480777]
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Tissue distribution of vista27568
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Transcription factor that possibly regulate vista27568[chr18:55480522-55480777]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55480514 55480876 JUN UCSC Txn Factor no Conserved 108337965
chr18 55480559 55480835 JUND UCSC Txn Factor no Conserved 108337975
chr18 55480522 55480531 SRY JASPAR yes 42713524
chr18 55480522 55480531 SRY JASPAR yes 110888578
chr18 55480524 55480533 SOX9 JASPAR yes 42713525
chr18 55480524 55480533 SOX9 JASPAR yes 110888579
chr18 55480554 55480559 ETS2 TRANSFAC yes 42713526
chr18 55480554 55480559 ETS2 TRANSFAC yes 110888580
chr18 55480554 55480564 TEAD1 JASPAR yes 42713527
chr18 55480554 55480564 TEAD4 JASPAR yes 42713528
chr18 55480554 55480564 TEAD1 JASPAR yes 110888581
chr18 55480554 55480564 TEAD4 JASPAR yes 110888582
chr18 55480555 55480563 TEAD3 JASPAR yes 42713529
chr18 55480555 55480563 TEAD3 JASPAR yes 110888583
chr18 55480569 55480574 GATA2 JASPAR yes 42713530
chr18 55480569 55480574 GATA2 JASPAR yes 110888584
chr18 55480575 55480591 POU4F2 JASPAR yes 42713531
chr18 55480575 55480591 POU4F3 JASPAR yes 42713532
chr18 55480575 55480591 POU4F2 JASPAR yes 110888585
chr18 55480575 55480591 POU4F3 JASPAR yes 110888586
chr18 55480577 55480591 POU4F1 JASPAR yes 42713533
chr18 55480577 55480591 POU4F1 JASPAR yes 110888587
chr18 55480581 55480597 SOX4 JASPAR yes 42713534
chr18 55480581 55480597 SOX4 JASPAR yes 110888588
chr18 55480592 55480604 POU2F1 JASPAR yes 42713535
chr18 55480592 55480604 POU2F1 JASPAR yes 110888589
chr18 55480594 55480603 POU3F4 JASPAR yes 42713536
chr18 55480594 55480603 POU5F1B JASPAR yes 42713537
chr18 55480594 55480603 POU3F4 JASPAR yes 110888590
chr18 55480594 55480603 POU5F1B JASPAR yes 110888591
chr18 55480598 55480613 FOXP1 JASPAR yes 42713538
chr18 55480598 55480613 FOXP1 JASPAR yes 110888592
chr18 55480600 55480612 FOXC2 JASPAR yes 42713539
chr18 55480600 55480612 FOXC2 JASPAR yes 110888593
chr18 55480601 55480613 FOXI1 JASPAR yes 42713540
chr18 55480601 55480613 FOXI1 JASPAR yes 110888594
chr18 55480602 55480610 FOXO3 JASPAR yes 42713541
chr18 55480602 55480610 FOXO3 JASPAR yes 110888595
chr18 55480603 55480612 SRY JASPAR yes 42713542
chr18 55480603 55480612 SRY JASPAR yes 110888596
chr18 55480615 55480627 PKNOX1 JASPAR yes 42713543
chr18 55480615 55480627 PKNOX2 JASPAR yes 42713544
chr18 55480615 55480627 TGIF1 JASPAR yes 42713545
chr18 55480615 55480627 TGIF2 JASPAR yes 42713546
chr18 55480615 55480627 PKNOX1 JASPAR yes 110888597
chr18 55480615 55480627 PKNOX2 JASPAR yes 110888598
chr18 55480615 55480627 TGIF1 JASPAR yes 110888599
chr18 55480615 55480627 TGIF2 JASPAR yes 110888600
chr18 55480626 55480630 LFA1 TRANSFAC yes 42713547
chr18 55480626 55480630 LFA1 TRANSFAC yes 110888601
chr18 55480628 55480637 SNAI2 JASPAR yes 42713548
chr18 55480628 55480637 SNAI2 JASPAR yes 110888602
chr18 55480629 55480634 USF2 TRANSFAC yes 42713549
chr18 55480629 55480634 USF2 TRANSFAC yes 110888603
chr18 55480648 55480658 TEAD1 JASPAR yes 42713550
chr18 55480648 55480658 TEAD4 JASPAR yes 42713551
chr18 55480648 55480658 TEAD1 JASPAR yes 110888604
chr18 55480648 55480658 TEAD4 JASPAR yes 110888605
chr18 55480649 55480657 TEAD3 JASPAR yes 42713552
chr18 55480649 55480657 TEAD3 JASPAR yes 110888606
chr18 55480730 55480741 FOSL2 JASPAR yes 42713553
chr18 55480730 55480741 JUNB JASPAR yes 42713554
chr18 55480730 55480741 FOSL2 JASPAR yes 110888607
chr18 55480730 55480741 JUNB JASPAR yes 110888608
chr18 55480731 55480742 FOS JASPAR yes 42713555
chr18 55480731 55480742 FOSL1 JASPAR yes 42713556
chr18 55480731 55480742 JUND JASPAR yes 42713557
chr18 55480731 55480742 NFE2 JASPAR yes 42713558
chr18 55480731 55480742 FOS JASPAR yes 110888609
chr18 55480731 55480742 FOSL1 JASPAR yes 110888610
chr18 55480731 55480742 JUND JASPAR yes 110888611
chr18 55480731 55480742 NFE2 JASPAR yes 110888612
chr18 55480732 55480741 JDP2 JASPAR yes 42713559
chr18 55480732 55480741 JDP2 JASPAR yes 110888613
chr18 55480732 55480743 FOSL2 JASPAR yes 42713560
chr18 55480732 55480743 JUNB JASPAR yes 42713561
chr18 55480732 55480743 FOSL2 JASPAR yes 110888614
chr18 55480732 55480743 JUNB JASPAR yes 110888615
chr18 55480732 55480746 JUN JASPAR yes 42713562
chr18 55480732 55480746 JUN JASPAR yes 110888616
chr18 55480746 55480753 NKX3-1 JASPAR yes 42713563
chr18 55480746 55480753 NKX3-1 JASPAR yes 110888617
SNP sites on vista27568[chr18:55480522-55480777]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55480525 rs146112602 A G
JUN SOX9 SRY
5278507
chr18 55480719 rs139227075 C T
JUN JUND
5278508
chr18 55480721 rs144060260 G A
JUN JUND
5278509
Genes possibly regulated by vista27568[chr18:55480522-55480777]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 55313658 55470333 - ATP8B1 ENSG00000081923.6 55470333 0.72 1.0 16610 89811
Expression level of Genes
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miRNAs possibly regulated by vista27568[chr18:55480522-55480777]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results