EnhancerDB
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  3. rs146112602[chr18:55480525]
Enhancers that have rs146112602[chr18:55480525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55476845 55489580 enh17732
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Spleen Epithelial (MCF-7)
chr18 55480522 55480777 vista27568
VISTA
Transcript factors that have rs146112602[chr18:55480525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55480438 55480822 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108337960
chr18 55480448 55480768 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823500
chr18 55480448 55480768 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108337961
chr18 55480458 55480788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823501
chr18 55480458 55480788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108337962
chr18 55480504 55480794 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823502
chr18 55480504 55480794 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108337963
chr18 55480514 55480804 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21823503
chr18 55480514 55480804 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108337964
chr18 55480514 55480876 JUN UCSC Txn Factor no Conserved 108337965
chr18 55480519 55480903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21823504
chr18 55480519 55480903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108337966
chr18 55480522 55480531 SRY JASPAR yes 42713524
chr18 55480522 55480531 SRY JASPAR yes 110888578
chr18 55480524 55480533 SOX9 JASPAR yes 42713525
chr18 55480524 55480533 SOX9 JASPAR yes 110888579
Genes associated with rs146112602[chr18:55480525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More