EnhancerDB
  1. Home
  2. Enhancers
  3. vista27583[chr18:55885380-55885802]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27583[chr18:55885380-55885802]
Back to top
Tissue distribution of vista27583
Back to top
Transcription factor that possibly regulate vista27583[chr18:55885380-55885802]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 55885399 55885677 CEBPB UCSC Txn Factor no Conserved 108338157
chr18 55885390 55885395 MYC TRANSFAC yes 42714229
chr18 55885390 55885395 MYC TRANSFAC yes 110928294
chr18 55885399 55885402 MYB TRANSFAC yes 42714230
chr18 55885399 55885402 MYB TRANSFAC yes 110928295
chr18 55885402 55885417 FOXP1 JASPAR yes 42714231
chr18 55885402 55885417 FOXP1 JASPAR yes 110928296
chr18 55885414 55885421 SPI1 JASPAR yes 42714232
chr18 55885414 55885421 SPI1 JASPAR yes 110928297
chr18 55885414 55885422 FEV JASPAR yes 42714233
chr18 55885414 55885422 FEV JASPAR yes 110928298
chr18 55885416 55885421 ETS2 TRANSFAC yes 42714234
chr18 55885416 55885421 ETS2 TRANSFAC yes 110928299
chr18 55885419 55885425 TCF4 TRANSFAC yes 42714235
chr18 55885419 55885425 TCF4 TRANSFAC yes 110928300
chr18 55885430 55885435 MYB TRANSFAC yes 42714236
chr18 55885430 55885435 MYB TRANSFAC yes 110928301
chr18 55885443 55885458 ESR2 JASPAR yes 42714237
chr18 55885443 55885458 ESR2 JASPAR yes 110928302
chr18 55885448 55885461 NR2F1 JASPAR yes 42714238
chr18 55885448 55885461 NR2F1 JASPAR yes 110928303
chr18 55885457 55885463 SOX10 JASPAR yes 42714239
chr18 55885457 55885463 SOX10 JASPAR yes 110928304
chr18 55885457 55885468 RUNX1 JASPAR yes 42714240
chr18 55885457 55885468 RUNX1 JASPAR yes 110928305
chr18 55885458 55885468 RUNX3 JASPAR yes 42714241
chr18 55885458 55885468 RUNX3 JASPAR yes 110928306
chr18 55885465 55885469 YY1 TRANSFAC yes 42714242
chr18 55885465 55885469 YY1 TRANSFAC yes 110928307
chr18 55885468 55885475 TBP TRANSFAC yes 42714243
chr18 55885468 55885475 TFIID TRANSFAC yes 42714244
chr18 55885468 55885475 TBP TRANSFAC yes 110928308
chr18 55885468 55885475 TFIID TRANSFAC yes 110928309
chr18 55885473 55885488 RUNX2 JASPAR yes 42714245
chr18 55885473 55885488 RUNX2 JASPAR yes 110928310
chr18 55885474 55885483 RUNX2 JASPAR yes 42714246
chr18 55885474 55885483 RUNX2 JASPAR yes 110928311
chr18 55885477 55885497 RREB1 JASPAR yes 42714247
chr18 55885477 55885497 RREB1 JASPAR yes 110928312
chr18 55885503 55885511 ISL2 JASPAR yes 42714248
chr18 55885503 55885511 ISL2 JASPAR yes 110928313
chr18 55885520 55885531 CEBPA JASPAR yes 42714249
chr18 55885520 55885531 CEBPA JASPAR yes 110928314
chr18 55885521 55885529 CEBPA TRANSFAC yes 42714250
chr18 55885521 55885529 CEBPA TRANSFAC yes 110928315
chr18 55885521 55885531 CEBPB JASPAR yes 42714251
chr18 55885521 55885531 CEBPE JASPAR yes 42714252
chr18 55885521 55885531 CEBPG JASPAR yes 42714253
chr18 55885521 55885531 CEBPB JASPAR yes 110928316
chr18 55885521 55885531 CEBPE JASPAR yes 110928317
chr18 55885521 55885531 CEBPG JASPAR yes 110928318
chr18 55885521 55885532 CEBPB JASPAR yes 42714254
chr18 55885521 55885532 CEBPB JASPAR yes 110928319
chr18 55885539 55885556 ZNF410 JASPAR yes 42714255
chr18 55885539 55885556 ZNF410 JASPAR yes 110928320
chr18 55885546 55885556 ERF JASPAR yes 42714256
chr18 55885546 55885556 ETV3 JASPAR yes 42714257
chr18 55885546 55885556 ETV6 JASPAR yes 42714258
chr18 55885546 55885556 ERF JASPAR yes 110928321
chr18 55885546 55885556 ETV3 JASPAR yes 110928322
chr18 55885546 55885556 ETV6 JASPAR yes 110928323
chr18 55885548 55885554 ETS1 JASPAR yes 42714259
chr18 55885548 55885554 SPI1 JASPAR yes 42714260
chr18 55885548 55885554 ETS1 JASPAR yes 110928324
chr18 55885548 55885554 SPI1 JASPAR yes 110928325
chr18 55885554 55885566 PKNOX2 JASPAR yes 42714261
chr18 55885554 55885566 PKNOX2 JASPAR yes 110928326
chr18 55885559 55885568 NFIX JASPAR yes 42714262
chr18 55885559 55885568 NFIX JASPAR yes 110928327
chr18 55885560 55885569 HIC2 JASPAR yes 42714263
chr18 55885560 55885569 HIC2 JASPAR yes 110928328
chr18 55885561 55885567 NFIC JASPAR yes 42714264
chr18 55885561 55885567 NFIC JASPAR yes 110928329
chr18 55885568 55885577 SOX9 JASPAR yes 42714265
chr18 55885568 55885577 SOX9 JASPAR yes 110928330
chr18 55885578 55885589 NRL JASPAR yes 42714266
chr18 55885578 55885589 NRL JASPAR yes 110928331
chr18 55885578 55885593 MAFK JASPAR yes 42714267
chr18 55885578 55885593 MAFK JASPAR yes 110928332
chr18 55885583 55885603 TBX19 JASPAR yes 42714268
chr18 55885583 55885603 TBX19 JASPAR yes 110928333
chr18 55885585 55885601 T JASPAR yes 42714269
chr18 55885585 55885601 T JASPAR yes 110928334
chr18 55885588 55885592 YY1 TRANSFAC yes 42714270
chr18 55885588 55885592 YY1 TRANSFAC yes 110928335
chr18 55885591 55885599 ISL2 JASPAR yes 42714271
chr18 55885591 55885599 ISL2 JASPAR yes 110928336
chr18 55885592 55885610 MAFF JASPAR yes 42714272
chr18 55885592 55885610 MAFF JASPAR yes 110928337
chr18 55885593 55885608 MAFK JASPAR yes 42714273
chr18 55885593 55885608 MAFK JASPAR yes 110928338
chr18 55885597 55885608 NRL JASPAR yes 42714274
chr18 55885597 55885608 NRL JASPAR yes 110928339
chr18 55885607 55885617 MNX1 JASPAR yes 42714275
chr18 55885607 55885617 MNX1 JASPAR yes 110928340
chr18 55885608 55885616 BARX1 JASPAR yes 42714276
chr18 55885608 55885616 BARX1 JASPAR yes 110928341
chr18 55885615 55885620 ETS2 TRANSFAC yes 42714277
chr18 55885615 55885620 ETS2 TRANSFAC yes 110928342
chr18 55885615 55885625 TEAD1 JASPAR yes 42714278
chr18 55885615 55885625 TEAD4 JASPAR yes 42714279
chr18 55885615 55885625 TEAD1 JASPAR yes 110928343
chr18 55885615 55885625 TEAD4 JASPAR yes 110928344
chr18 55885616 55885624 TEAD3 JASPAR yes 42714280
chr18 55885616 55885624 TEAD3 JASPAR yes 110928345
chr18 55885626 55885640 RXRB JASPAR yes 42714281
chr18 55885626 55885640 RXRB JASPAR yes 110928346
chr18 55885634 55885637 MYB TRANSFAC yes 42714282
chr18 55885634 55885637 MYB TRANSFAC yes 110928347
chr18 55885640 55885644 YY1 TRANSFAC yes 42714283
chr18 55885640 55885644 YY1 TRANSFAC yes 110928348
chr18 55885640 55885651 CEBPA JASPAR yes 42714284
chr18 55885640 55885651 CEBPA JASPAR yes 110928349
chr18 55885641 55885652 CEBPB JASPAR yes 42714285
chr18 55885641 55885652 CEBPB JASPAR yes 110928350
chr18 55885679 55885700 IRF1 JASPAR yes 42714286
chr18 55885679 55885700 IRF1 JASPAR yes 110928351
chr18 55885683 55885701 IRF2 JASPAR yes 42714287
chr18 55885683 55885701 IRF2 JASPAR yes 110928352
chr18 55885688 55885694 TCF4 TRANSFAC yes 42714288
chr18 55885688 55885694 TCF4 TRANSFAC yes 110928353
chr18 55885741 55885751 ID4 JASPAR yes 42714289
chr18 55885741 55885751 ID4 JASPAR yes 110928354
chr18 55885747 55885764 RARA JASPAR yes 42714290
chr18 55885747 55885764 RXRA JASPAR yes 42714291
chr18 55885747 55885764 RARA JASPAR yes 110928355
chr18 55885747 55885764 RXRA JASPAR yes 110928356
chr18 55885756 55885767 ESRRA JASPAR yes 42714292
chr18 55885756 55885767 ESRRB JASPAR yes 42714293
chr18 55885756 55885767 ESRRA JASPAR yes 110928357
chr18 55885756 55885767 ESRRB JASPAR yes 110928358
chr18 55885757 55885765 NR4A2 JASPAR yes 42714294
chr18 55885757 55885765 NR4A2 JASPAR yes 110928359
chr18 55885758 55885768 RORA JASPAR yes 42714295
chr18 55885758 55885768 RORA JASPAR yes 110928360
chr18 55885779 55885794 HSF1 JASPAR yes 42714296
chr18 55885779 55885794 HSF1 JASPAR yes 110928361
chr18 55885784 55885799 HSF1 JASPAR yes 42714297
chr18 55885784 55885799 HSF1 JASPAR yes 110928362
chr18 55885785 55885798 HSF1 JASPAR yes 42714298
chr18 55885785 55885798 HSF1 JASPAR yes 110928363
SNP sites on vista27583[chr18:55885380-55885802]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 55885392 rs560995944 AG A
MYC
5282796
chr18 55885406 rs538158842 T A
CEBPB FOXP1
5282797
chr18 55885505 rs17064483 T C,G
CEBPB ISL2
5282798
chr18 55885530 rs75097315 A G
CEBPA CEBPB CEBPE CEBPG
5282799
chr18 55885638 rs571813177 C A
CEBPB RXRB
5282800
chr18 55885676 rs183235370 G C
CEBPB
5282801
chr18 55885711 rs142223998 C A no 5282802
chr18 55885732 rs563074195 C G no 5282803
Genes possibly regulated by vista27583[chr18:55885380-55885802]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista27583[chr18:55885380-55885802]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results