EnhancerDB
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Enhancers that have rs142223998[chr18:55885711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr18 55885380 55885802 vista27583
VISTA
Transcript factors that have rs142223998[chr18:55885711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55885298 55885802 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824034
chr18 55885298 55885802 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338148
chr18 55885327 55885711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824035
chr18 55885327 55885711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338149
chr18 55885348 55885804 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824037
chr18 55885348 55885804 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338151
chr18 55885366 55885762 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824039
chr18 55885366 55885762 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338153
chr18 55885397 55885717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824041
chr18 55885397 55885717 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338155
chr18 55885417 55885757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824043
chr18 55885417 55885757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338159
chr18 55885494 55886044 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824044
chr18 55885494 55886044 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338160
chr18 55885547 55886003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824045
chr18 55885547 55886003 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338161
Genes associated with rs142223998[chr18:55885711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More