EnhancerDB
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  3. vista27608[chr18:56206749-56207237]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27608[chr18:56206749-56207237]
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Tissue distribution of vista27608
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Transcription factor that possibly regulate vista27608[chr18:56206749-56207237]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56201636 56207333 POLR2A UCSC Txn Factor no Conserved 108338393
chr18 56206740 56206751 CEBPB JASPAR yes 42715421
chr18 56206740 56206751 CEBPB JASPAR yes 110956663
chr18 56206741 56206752 CEBPA JASPAR yes 42715422
chr18 56206741 56206752 CEBPA JASPAR yes 110956664
chr18 56206749 56206755 SOX10 JASPAR yes 42715423
chr18 56206749 56206755 SOX10 JASPAR yes 110956665
chr18 56206785 56206800 STAT2 JASPAR yes 42715424
chr18 56206785 56206800 STAT2 JASPAR yes 110956666
chr18 56206813 56206819 TCF4 TRANSFAC yes 42715425
chr18 56206813 56206819 TCF4 TRANSFAC yes 110956667
chr18 56206846 56206859 ZBTB18 JASPAR yes 42715426
chr18 56206846 56206859 ZBTB18 JASPAR yes 110956668
chr18 56206880 56206885 SP1 TRANSFAC yes 42715427
chr18 56206880 56206885 SP1 TRANSFAC yes 110956669
chr18 56206883 56206903 RREB1 JASPAR yes 42715428
chr18 56206883 56206903 RREB1 JASPAR yes 110956670
chr18 56206888 56206902 PLAG1 JASPAR yes 42715429
chr18 56206888 56206902 PLAG1 JASPAR yes 110956671
chr18 56206888 56206903 NR2C2 JASPAR yes 42715430
chr18 56206888 56206903 NR2C2 JASPAR yes 110956672
chr18 56206889 56206903 RXRB JASPAR yes 42715431
chr18 56206889 56206903 RXRG JASPAR yes 42715432
chr18 56206889 56206903 RXRB JASPAR yes 110956673
chr18 56206889 56206903 RXRG JASPAR yes 110956674
chr18 56206898 56206903 SP1 TRANSFAC yes 42715433
chr18 56206898 56206903 SP1 TRANSFAC yes 110956675
chr18 56206900 56206905 TFAP2A TRANSFAC yes 42715434
chr18 56206900 56206905 TFAP2A TRANSFAC yes 110956676
chr18 56206900 56206906 MZF1 JASPAR yes 42715435
chr18 56206900 56206906 MZF1 JASPAR yes 110956677
chr18 56206908 56206921 SMAD2 JASPAR yes 42715436
chr18 56206908 56206921 SMAD2 JASPAR yes 110956678
chr18 56206912 56206916 NFE TRANSFAC yes 42715437
chr18 56206912 56206916 NFE TRANSFAC yes 110956679
chr18 56206912 56206925 SMAD2 JASPAR yes 42715438
chr18 56206912 56206925 SMAD2 JASPAR yes 110956680
chr18 56206937 56206955 RARA JASPAR yes 42715439
chr18 56206937 56206955 RARA JASPAR yes 110956681
chr18 56206953 56206957 LFA1 TRANSFAC yes 42715440
chr18 56206953 56206957 LFA1 TRANSFAC yes 110956682
chr18 56206968 56206972 H1TF2 TRANSFAC yes 42715441
chr18 56206968 56206972 NFE TRANSFAC yes 42715442
chr18 56206968 56206972 SRF TRANSFAC yes 42715443
chr18 56206968 56206972 H1TF2 TRANSFAC yes 110956683
chr18 56206968 56206972 NFE TRANSFAC yes 110956684
chr18 56206968 56206972 SRF TRANSFAC yes 110956685
chr18 56206968 56206979 ESRRA JASPAR yes 42715444
chr18 56206968 56206979 ESRRA JASPAR yes 110956686
chr18 56206987 56206998 HOXC13 JASPAR yes 42715445
chr18 56206987 56206998 HOXC13 JASPAR yes 110956687
chr18 56206988 56207004 POU4F3 JASPAR yes 42715446
chr18 56206988 56207004 POU4F3 JASPAR yes 110956688
chr18 56206990 56207004 POU4F1 JASPAR yes 42715447
chr18 56206990 56207004 POU4F1 JASPAR yes 110956689
chr18 56207027 56207031 ESR1 TRANSFAC yes 42715448
chr18 56207027 56207031 ESR1 TRANSFAC yes 110956690
chr18 56207043 56207058 TFAP2A JASPAR yes 42715449
chr18 56207043 56207058 TFAP2A JASPAR yes 110956691
chr18 56207053 56207058 ETS2 TRANSFAC yes 42715450
chr18 56207053 56207058 ETS2 TRANSFAC yes 110956692
chr18 56207071 56207084 EOMES JASPAR yes 42715451
chr18 56207071 56207084 EOMES JASPAR yes 110956693
chr18 56207073 56207083 TBR1 JASPAR yes 42715452
chr18 56207073 56207083 TBR1 JASPAR yes 110956694
chr18 56207073 56207084 TBX20 JASPAR yes 42715453
chr18 56207073 56207084 TBX2 JASPAR yes 42715454
chr18 56207073 56207084 TBX20 JASPAR yes 110956695
chr18 56207073 56207084 TBX2 JASPAR yes 110956696
chr18 56207074 56207084 TBX21 JASPAR yes 42715455
chr18 56207074 56207084 TBX21 JASPAR yes 110956697
chr18 56207075 56207083 MGA JASPAR yes 42715456
chr18 56207075 56207083 TBX15 JASPAR yes 42715457
chr18 56207075 56207083 TBX1 JASPAR yes 42715458
chr18 56207075 56207083 TBX4 JASPAR yes 42715459
chr18 56207075 56207083 TBX5 JASPAR yes 42715460
chr18 56207075 56207083 MGA JASPAR yes 110956698
chr18 56207075 56207083 TBX15 JASPAR yes 110956699
chr18 56207075 56207083 TBX1 JASPAR yes 110956700
chr18 56207075 56207083 TBX4 JASPAR yes 110956701
chr18 56207075 56207083 TBX5 JASPAR yes 110956702
chr18 56207079 56207100 ZNF263 JASPAR yes 42715461
chr18 56207079 56207100 ZNF263 JASPAR yes 110956703
chr18 56207084 56207098 MTF1 JASPAR yes 42715462
chr18 56207084 56207098 MTF1 JASPAR yes 110956704
chr18 56207090 56207100 ETV6 JASPAR yes 42715463
chr18 56207090 56207100 ETV6 JASPAR yes 110956705
chr18 56207091 56207106 TFAP2C JASPAR yes 42715464
chr18 56207091 56207106 TFAP2C JASPAR yes 110956706
chr18 56207093 56207105 INSM1 JASPAR yes 42715465
chr18 56207093 56207105 INSM1 JASPAR yes 110956707
chr18 56207093 56207108 TFAP2A JASPAR yes 42715466
chr18 56207093 56207108 TFAP2A JASPAR yes 110956708
chr18 56207094 56207105 TFAP2A JASPAR yes 42715467
chr18 56207094 56207105 TFAP2B JASPAR yes 42715468
chr18 56207094 56207105 TFAP2A JASPAR yes 110956709
chr18 56207094 56207105 TFAP2B JASPAR yes 110956710
chr18 56207095 56207104 TFAP2A JASPAR yes 42715469
chr18 56207095 56207104 TFAP2A JASPAR yes 110956711
chr18 56207114 56207118 NFE TRANSFAC yes 42715470
chr18 56207114 56207118 NFE TRANSFAC yes 110956712
chr18 56207124 56207145 IRF1 JASPAR yes 42715471
chr18 56207124 56207145 IRF1 JASPAR yes 110956713
chr18 56207130 56207151 IRF1 JASPAR yes 42715472
chr18 56207130 56207151 IRF1 JASPAR yes 110956714
chr18 56207132 56207147 PRDM1 JASPAR yes 42715473
chr18 56207132 56207147 PRDM1 JASPAR yes 110956715
chr18 56207133 56207137 YY1 TRANSFAC yes 42715474
chr18 56207133 56207137 YY1 TRANSFAC yes 110956716
chr18 56207163 56207167 YY1 TRANSFAC yes 42715475
chr18 56207163 56207167 YY1 TRANSFAC yes 110956717
chr18 56207167 56207170 MYB TRANSFAC yes 42715476
chr18 56207167 56207170 MYB TRANSFAC yes 110956718
chr18 56207169 56207183 POU4F1 JASPAR yes 42715477
chr18 56207169 56207183 POU4F1 JASPAR yes 110956719
chr18 56207169 56207185 POU4F2 JASPAR yes 42715478
chr18 56207169 56207185 POU4F3 JASPAR yes 42715479
chr18 56207169 56207185 POU4F2 JASPAR yes 110956720
chr18 56207169 56207185 POU4F3 JASPAR yes 110956721
chr18 56207170 56207182 HNF1B JASPAR yes 42715480
chr18 56207170 56207182 HNF1B JASPAR yes 110956722
chr18 56207174 56207178 YY1 TRANSFAC yes 42715481
chr18 56207174 56207178 YY1 TRANSFAC yes 110956723
chr18 56207179 56207188 HIC2 JASPAR yes 42715482
chr18 56207179 56207188 HIC2 JASPAR yes 110956724
chr18 56207182 56207186 LFA1 TRANSFAC yes 42715483
chr18 56207182 56207186 LFA1 TRANSFAC yes 110956725
chr18 56207189 56207202 POU3F3 JASPAR yes 42715484
chr18 56207189 56207202 POU3F3 JASPAR yes 110956726
chr18 56207189 56207203 POU1F1 JASPAR yes 42715485
chr18 56207189 56207203 POU1F1 JASPAR yes 110956727
chr18 56207189 56207210 MAFG JASPAR yes 42715486
chr18 56207189 56207210 MAFG JASPAR yes 110956728
chr18 56207196 56207199 MYB TRANSFAC yes 42715487
chr18 56207196 56207199 MYB TRANSFAC yes 110956729
chr18 56207197 56207209 FOXI1 JASPAR yes 42715488
chr18 56207197 56207209 FOXI1 JASPAR yes 110956730
chr18 56207201 56207215 TCF7L2 JASPAR yes 42715489
chr18 56207201 56207215 TCF7L2 JASPAR yes 110956731
chr18 56207201 56207216 LEF1 JASPAR yes 42715490
chr18 56207201 56207216 LEF1 JASPAR yes 110956732
chr18 56207220 56207224 TEAD2 TRANSFAC yes 42715491
chr18 56207220 56207224 TEAD2 TRANSFAC yes 110956733
chr18 56207220 56207225 TBP TRANSFAC yes 42715492
chr18 56207220 56207225 TBP TRANSFAC yes 110956734
SNP sites on vista27608[chr18:56206749-56207237]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56206883 rs60431683 C T
POLR2A RREB1 SP1
5285595
chr18 56206931 rs71357603 C T
POLR2A
5285596
chr18 56206955 rs9965985 G T
LFA1 POLR2A RARA
5285597
chr18 56207218 rs60406350 T A
POLR2A
5285598
Genes possibly regulated by vista27608[chr18:56206749-56207237]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56148479 56296189 - ALPK2 ENSG00000198796.6 56296189 0.97 0.97 16612 11048
Expression level of Genes
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miRNAs possibly regulated by vista27608[chr18:56206749-56207237]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results