EnhancerDB
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  3. vista27612[chr18:56232351-56232608]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27612[chr18:56232351-56232608]
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Tissue distribution of vista27612
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Transcription factor that possibly regulate vista27612[chr18:56232351-56232608]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56232381 56232615 SPI1 UCSC Txn Factor no Conserved 108338501
chr18 56232351 56232363 PBX1 JASPAR yes 42715609
chr18 56232351 56232363 PBX1 JASPAR yes 110960026
chr18 56232359 56232363 YY1 TRANSFAC yes 42715610
chr18 56232359 56232363 YY1 TRANSFAC yes 110960027
chr18 56232374 56232378 YY1 TRANSFAC yes 42715611
chr18 56232374 56232378 YY1 TRANSFAC yes 110960028
chr18 56232379 56232383 YY1 TRANSFAC yes 42715612
chr18 56232379 56232383 YY1 TRANSFAC yes 110960029
chr18 56232389 56232401 HNF1B JASPAR yes 42715613
chr18 56232389 56232401 HNF1B JASPAR yes 110960030
chr18 56232396 56232416 TP53 JASPAR yes 42715614
chr18 56232396 56232416 TP53 JASPAR yes 110960031
chr18 56232401 56232405 YY1 TRANSFAC yes 42715615
chr18 56232401 56232405 YY1 TRANSFAC yes 110960032
chr18 56232401 56232417 RFX2 JASPAR yes 42715616
chr18 56232401 56232417 RFX3 JASPAR yes 42715617
chr18 56232401 56232417 RFX4 JASPAR yes 42715618
chr18 56232401 56232417 RFX5 JASPAR yes 42715619
chr18 56232401 56232417 RFX2 JASPAR yes 110960033
chr18 56232401 56232417 RFX3 JASPAR yes 110960034
chr18 56232401 56232417 RFX4 JASPAR yes 110960035
chr18 56232401 56232417 RFX5 JASPAR yes 110960036
chr18 56232402 56232410 FEV JASPAR yes 42715620
chr18 56232402 56232410 FEV JASPAR yes 110960037
chr18 56232402 56232421 RFX2 JASPAR yes 42715621
chr18 56232402 56232421 RFX2 JASPAR yes 110960038
chr18 56232404 56232409 ETS2 TRANSFAC yes 42715622
chr18 56232404 56232409 ETS2 TRANSFAC yes 110960039
chr18 56232415 56232431 RFX2 JASPAR yes 42715623
chr18 56232415 56232431 RFX3 JASPAR yes 42715624
chr18 56232415 56232431 RFX4 JASPAR yes 42715625
chr18 56232415 56232431 RFX5 JASPAR yes 42715626
chr18 56232415 56232431 RFX2 JASPAR yes 110960040
chr18 56232415 56232431 RFX3 JASPAR yes 110960041
chr18 56232415 56232431 RFX4 JASPAR yes 110960042
chr18 56232415 56232431 RFX5 JASPAR yes 110960043
chr18 56232416 56232435 RFX2 JASPAR yes 42715627
chr18 56232416 56232435 RFX2 JASPAR yes 110960044
chr18 56232418 56232423 ETS2 TRANSFAC yes 42715628
chr18 56232418 56232423 ETS2 TRANSFAC yes 110960045
chr18 56232441 56232456 JUND JASPAR yes 42715629
chr18 56232441 56232456 JUND JASPAR yes 110960046
chr18 56232441 56232461 TP63 JASPAR yes 42715630
chr18 56232441 56232461 TP63 JASPAR yes 110960047
chr18 56232442 56232455 JUN JASPAR yes 42715631
chr18 56232442 56232455 JUN JASPAR yes 110960048
chr18 56232442 56232460 TP63 JASPAR yes 42715632
chr18 56232442 56232460 TP73 JASPAR yes 42715633
chr18 56232442 56232460 TP63 JASPAR yes 110960049
chr18 56232442 56232460 TP73 JASPAR yes 110960050
chr18 56232443 56232457 ATF7 JASPAR yes 42715634
chr18 56232443 56232457 ATF7 JASPAR yes 110960051
chr18 56232443 56232458 TP53 JASPAR yes 42715635
chr18 56232443 56232458 TP53 JASPAR yes 110960052
chr18 56232444 56232456 JDP2 JASPAR yes 42715636
chr18 56232444 56232456 JDP2 JASPAR yes 110960053
chr18 56232449 56232460 USF1 JASPAR yes 42715637
chr18 56232449 56232460 USF2 JASPAR yes 42715638
chr18 56232449 56232460 USF1 JASPAR yes 110960054
chr18 56232449 56232460 USF2 JASPAR yes 110960055
chr18 56232450 56232460 TFEB JASPAR yes 42715639
chr18 56232450 56232460 TFEC JASPAR yes 42715640
chr18 56232450 56232460 TFEB JASPAR yes 110960056
chr18 56232450 56232460 TFEC JASPAR yes 110960057
chr18 56232459 56232464 ETS2 TRANSFAC yes 42715641
chr18 56232459 56232464 ETS2 TRANSFAC yes 110960058
chr18 56232497 56232518 IRF1 JASPAR yes 42715642
chr18 56232497 56232518 IRF1 JASPAR yes 110960059
chr18 56232501 56232515 STAT1 JASPAR yes 42715643
chr18 56232501 56232515 STAT1 JASPAR yes 110960060
chr18 56232501 56232516 PRDM1 JASPAR yes 42715644
chr18 56232501 56232516 STAT2 JASPAR yes 42715645
chr18 56232501 56232516 PRDM1 JASPAR yes 110960061
chr18 56232501 56232516 STAT2 JASPAR yes 110960062
chr18 56232502 56232514 IRF1 JASPAR yes 42715646
chr18 56232502 56232514 IRF1 JASPAR yes 110960063
chr18 56232513 56232524 NFE2L2 JASPAR yes 42715647
chr18 56232513 56232524 NFE2L2 JASPAR yes 110960064
chr18 56232513 56232529 ZNF143 JASPAR yes 42715648
chr18 56232513 56232529 ZNF143 JASPAR yes 110960065
chr18 56232534 56232546 IRF1 JASPAR yes 42715649
chr18 56232534 56232546 IRF1 JASPAR yes 110960066
chr18 56232575 56232585 NFIA JASPAR yes 42715650
chr18 56232575 56232585 NFIA JASPAR yes 110960067
chr18 56232577 56232583 NFIC JASPAR yes 42715651
chr18 56232577 56232583 NFIC JASPAR yes 110960068
chr18 56232580 56232591 DUX4 JASPAR yes 42715652
chr18 56232580 56232591 DUX4 JASPAR yes 110960069
chr18 56232606 56232610 YY1 TRANSFAC yes 42715653
chr18 56232606 56232610 YY1 TRANSFAC yes 110960070
chr18 56232607 56232615 FEV JASPAR yes 42715654
chr18 56232607 56232615 FEV JASPAR yes 110960071
SNP sites on vista27612[chr18:56232351-56232608]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56232398 rs142522818 TGAACATTTCCTTA T
HNF1B SPI1 TP53
5285942
chr18 56232496 rs147658092 G A
SPI1
5285943
chr18 56232556 rs145664445 TAAGAGATTTTTA T
SPI1
5285944
chr18 56232556 rs376627602 TAAGAGATTTTTA T
SPI1
5285945
Genes possibly regulated by vista27612[chr18:56232351-56232608]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56148479 56296189 - ALPK2 ENSG00000198796.6 56296189 0.97 0.97 16612 36419
Expression level of Genes
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miRNAs possibly regulated by vista27612[chr18:56232351-56232608]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results