EnhancerDB
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  3. rs142522818[chr18:56232398]
Enhancers that have rs142522818[chr18:56232398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr18 56232351 56232608 vista27612
VISTA
Transcript factors that have rs142522818[chr18:56232398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56232169 56232765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824220
chr18 56232169 56232765 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338494
chr18 56232251 56232521 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824221
chr18 56232251 56232521 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338495
chr18 56232288 56232672 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824222
chr18 56232288 56232672 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338496
chr18 56232304 56232634 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824223
chr18 56232304 56232634 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338497
chr18 56232304 56232660 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824224
chr18 56232304 56232660 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338498
chr18 56232321 56232691 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824225
chr18 56232321 56232691 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338499
chr18 56232348 56232628 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824226
chr18 56232348 56232628 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338500
chr18 56232381 56232615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824227
chr18 56232381 56232615 SPI1 UCSC Txn Factor no Conserved 108338501
chr18 56232381 56232615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338502
chr18 56232389 56232401 HNF1B JASPAR yes 42715613
chr18 56232389 56232401 HNF1B JASPAR yes 110960030
chr18 56232396 56232416 TP53 JASPAR yes 42715614
chr18 56232396 56232416 TP53 JASPAR yes 110960031
Genes associated with rs142522818[chr18:56232398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More