EnhancerDB
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  3. vista27616[chr18:56291277-56291473]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27616[chr18:56291277-56291473]
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Tissue distribution of vista27616
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Transcription factor that possibly regulate vista27616[chr18:56291277-56291473]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56291271 56291286 MAFK JASPAR yes 42715723
chr18 56291271 56291286 MAFK JASPAR yes 110966738
chr18 56291285 56291290 TFAP2A TRANSFAC yes 42715724
chr18 56291285 56291290 TFAP2A TRANSFAC yes 110966739
chr18 56291285 56291291 MZF1 JASPAR yes 42715725
chr18 56291285 56291291 MZF1 JASPAR yes 110966740
chr18 56291302 56291323 ZNF263 JASPAR yes 42715726
chr18 56291302 56291323 ZNF263 JASPAR yes 110966741
chr18 56291309 56291320 FLI1 JASPAR yes 42715727
chr18 56291309 56291320 FLI1 JASPAR yes 110966742
chr18 56291310 56291323 ELF1 JASPAR yes 42715728
chr18 56291310 56291323 ELF1 JASPAR yes 110966743
chr18 56291311 56291319 EHF JASPAR yes 42715729
chr18 56291311 56291319 EHF JASPAR yes 110966744
chr18 56291313 56291332 PAX5 JASPAR yes 42715730
chr18 56291313 56291332 PAX5 JASPAR yes 110966745
chr18 56291318 56291333 FOXA1 JASPAR yes 42715731
chr18 56291318 56291333 FOXA1 JASPAR yes 110966746
chr18 56291319 56291325 LEF1 TRANSFAC yes 42715732
chr18 56291319 56291325 SOX10 JASPAR yes 42715733
chr18 56291319 56291325 LEF1 TRANSFAC yes 110966747
chr18 56291319 56291325 SOX10 JASPAR yes 110966748
chr18 56291320 56291332 FOXC2 JASPAR yes 42715734
chr18 56291320 56291332 FOXC2 JASPAR yes 110966749
chr18 56291322 56291333 FOXA1 JASPAR yes 42715735
chr18 56291322 56291333 FOXA1 JASPAR yes 110966750
chr18 56291324 56291342 NFYA JASPAR yes 42715736
chr18 56291324 56291342 NFYA JASPAR yes 110966751
chr18 56291327 56291343 NFYA JASPAR yes 42715737
chr18 56291327 56291343 NFYA JASPAR yes 110966752
chr18 56291329 56291341 PBX1 JASPAR yes 42715738
chr18 56291329 56291341 PBX1 JASPAR yes 110966753
chr18 56291330 56291345 NFYB JASPAR yes 42715739
chr18 56291330 56291345 NFYB JASPAR yes 110966754
chr18 56291332 56291337 NFY TRANSFAC yes 42715740
chr18 56291332 56291337 NFY TRANSFAC yes 110966755
chr18 56291357 56291361 ESR1 TRANSFAC yes 42715741
chr18 56291357 56291361 ESR1 TRANSFAC yes 110966756
chr18 56291362 56291375 DUXA JASPAR yes 42715742
chr18 56291362 56291375 DUXA JASPAR yes 110966757
chr18 56291363 56291374 BATF JASPAR yes 42715743
chr18 56291363 56291374 DUX4 JASPAR yes 42715744
chr18 56291363 56291374 BATF JASPAR yes 110966758
chr18 56291363 56291374 DUX4 JASPAR yes 110966759
chr18 56291364 56291377 ATF4 JASPAR yes 42715745
chr18 56291364 56291377 ATF4 JASPAR yes 110966760
chr18 56291365 56291376 FOS JASPAR yes 42715746
chr18 56291365 56291376 FOSL1 JASPAR yes 42715747
chr18 56291365 56291376 FOS JASPAR yes 110966761
chr18 56291365 56291376 FOSL1 JASPAR yes 110966762
chr18 56291366 56291375 JDP2 JASPAR yes 42715748
chr18 56291366 56291375 JDP2 JASPAR yes 110966763
chr18 56291366 56291377 JUNB JASPAR yes 42715749
chr18 56291366 56291377 JUNB JASPAR yes 110966764
chr18 56291366 56291380 JUN JASPAR yes 42715750
chr18 56291366 56291380 JUN JASPAR yes 110966765
chr18 56291367 56291378 BATF JASPAR yes 42715751
chr18 56291367 56291378 BATF JASPAR yes 110966766
chr18 56291369 56291379 EMX1 JASPAR yes 42715752
chr18 56291369 56291379 HOXB2 JASPAR yes 42715753
chr18 56291369 56291379 HOXB3 JASPAR yes 42715754
chr18 56291369 56291379 MEOX1 JASPAR yes 42715755
chr18 56291369 56291379 MEOX2 JASPAR yes 42715756
chr18 56291369 56291379 EMX1 JASPAR yes 110966767
chr18 56291369 56291379 HOXB2 JASPAR yes 110966768
chr18 56291369 56291379 HOXB3 JASPAR yes 110966769
chr18 56291369 56291379 MEOX1 JASPAR yes 110966770
chr18 56291369 56291379 MEOX2 JASPAR yes 110966771
chr18 56291370 56291378 NKX6-1 JASPAR yes 42715757
chr18 56291370 56291378 NKX6-1 JASPAR yes 110966772
chr18 56291372 56291376 YY1 TRANSFAC yes 42715758
chr18 56291372 56291376 YY1 TRANSFAC yes 110966773
chr18 56291375 56291378 MYB TRANSFAC yes 42715759
chr18 56291375 56291378 MYB TRANSFAC yes 110966774
chr18 56291383 56291398 NFYB JASPAR yes 42715760
chr18 56291383 56291398 NFYB JASPAR yes 110966775
chr18 56291385 56291398 DUXA JASPAR yes 42715761
chr18 56291385 56291398 DUXA JASPAR yes 110966776
chr18 56291385 56291401 NFYA JASPAR yes 42715762
chr18 56291385 56291401 NFYA JASPAR yes 110966777
chr18 56291386 56291397 DUX4 JASPAR yes 42715763
chr18 56291386 56291397 DUX4 JASPAR yes 110966778
chr18 56291386 56291404 NFYA JASPAR yes 42715764
chr18 56291386 56291404 NFYA JASPAR yes 110966779
chr18 56291390 56291394 H1TF2 TRANSFAC yes 42715765
chr18 56291390 56291394 NFE TRANSFAC yes 42715766
chr18 56291390 56291394 SRF TRANSFAC yes 42715767
chr18 56291390 56291394 H1TF2 TRANSFAC yes 110966780
chr18 56291390 56291394 NFE TRANSFAC yes 110966781
chr18 56291390 56291394 SRF TRANSFAC yes 110966782
chr18 56291392 56291402 MAX JASPAR yes 42715768
chr18 56291392 56291402 MAX JASPAR yes 110966783
chr18 56291392 56291403 USF2 JASPAR yes 42715769
chr18 56291392 56291403 USF2 JASPAR yes 110966784
chr18 56291392 56291407 SCRT1 JASPAR yes 42715770
chr18 56291392 56291407 SCRT1 JASPAR yes 110966785
chr18 56291394 56291406 PKNOX2 JASPAR yes 42715771
chr18 56291394 56291406 PKNOX2 JASPAR yes 110966786
chr18 56291412 56291426 RORA JASPAR yes 42715772
chr18 56291412 56291426 RORA JASPAR yes 110966787
chr18 56291417 56291432 NR2C2 JASPAR yes 42715773
chr18 56291417 56291432 NR2C2 JASPAR yes 110966788
chr18 56291418 56291432 RXRB JASPAR yes 42715774
chr18 56291418 56291432 RXRG JASPAR yes 42715775
chr18 56291418 56291432 RXRB JASPAR yes 110966789
chr18 56291418 56291432 RXRG JASPAR yes 110966790
chr18 56291441 56291447 TCF4 TRANSFAC yes 42715776
chr18 56291441 56291447 TCF4 TRANSFAC yes 110966791
chr18 56291468 56291474 ZNF354C JASPAR yes 42715777
chr18 56291468 56291474 ZNF354C JASPAR yes 110966792
chr18 56291471 56291492 IRF1 JASPAR yes 42715778
chr18 56291471 56291492 IRF1 JASPAR yes 110966793
SNP sites on vista27616[chr18:56291277-56291473]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56291328 rs116270839 G A
FOXA1 FOXC2 NFYA PAX5
5286582
chr18 56291466 rs78368127 G A,C no 5286583
Genes possibly regulated by vista27616[chr18:56291277-56291473]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56148479 56296189 - ALPK2 ENSG00000198796.6 56296189 0.97 0.97 16612 95284
chr18 56338618 56417371 + MALT1 ENSG00000172175.8 56338618 0.74 1.0 16613 52855
Expression level of Genes
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miRNAs possibly regulated by vista27616[chr18:56291277-56291473]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results