EnhancerDB
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  3. rs116270839[chr18:56291328]
Enhancers that have rs116270839[chr18:56291328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56280785 56293595 enh48129
Large Intestine Blood (T-cell) Lung Muscle (A673) Peripheral Blood (MM.1S) Thymus Heart
chr18 56291277 56291473 vista27616
VISTA
Transcript factors that have rs116270839[chr18:56291328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56291147 56291654 ZNF143 GTRD no Epithelial (MCF-7) 108338556
chr18 56291217 56291663 ZNF143 GTRD no Epithelial (MCF-7) 108338557
chr18 56291262 56291687 ZNF143 GTRD no Epithelial (MCF-7) 108338558
chr18 56291277 56291662 ZNF143 GTRD no Epithelial (MCF-7) 108338559
chr18 56291281 56291818 ZNF143 GTRD no Epithelial (MCF-7) 108338560
chr18 56291295 56291852 ZNF143 GTRD no Epithelial (MCF-7) 108338561
chr18 56291310 56291606 ZBTB33 GTRD no Lung (A549) 108338562
chr18 56291313 56291332 PAX5 JASPAR yes 42715730
chr18 56291313 56291332 PAX5 JASPAR yes 110966745
chr18 56291318 56291333 FOXA1 JASPAR yes 42715731
chr18 56291318 56291333 FOXA1 JASPAR yes 110966746
chr18 56291320 56291332 FOXC2 JASPAR yes 42715734
chr18 56291320 56291332 FOXC2 JASPAR yes 110966749
chr18 56291322 56291333 FOXA1 JASPAR yes 42715735
chr18 56291322 56291333 FOXA1 JASPAR yes 110966750
chr18 56291324 56291342 NFYA JASPAR yes 42715736
chr18 56291324 56291342 NFYA JASPAR yes 110966751
chr18 56291327 56291343 NFYA JASPAR yes 42715737
chr18 56291327 56291343 NFYA JASPAR yes 110966752
Genes associated with rs116270839[chr18:56291328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More