EnhancerDB
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  3. vista27626[chr18:56494810-56495111]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27626[chr18:56494810-56495111]
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Tissue distribution of vista27626
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Transcription factor that possibly regulate vista27626[chr18:56494810-56495111]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56494807 56494812 MYC TRANSFAC yes 42716175
chr18 56494807 56494812 MYC TRANSFAC yes 110981790
chr18 56494855 56494865 SP1 JASPAR yes 42716176
chr18 56494855 56494865 SP1 JASPAR yes 110981791
chr18 56494858 56494868 GCM2 JASPAR yes 42716177
chr18 56494858 56494868 GCM2 JASPAR yes 110981792
chr18 56494863 56494881 MAFF JASPAR yes 42716178
chr18 56494863 56494881 MAFF JASPAR yes 110981793
chr18 56494865 56494876 NRL JASPAR yes 42716179
chr18 56494865 56494876 NRL JASPAR yes 110981794
chr18 56494865 56494880 MAFK JASPAR yes 42716180
chr18 56494865 56494880 MAFK JASPAR yes 110981795
chr18 56494865 56494883 NFYA JASPAR yes 42716181
chr18 56494865 56494883 NFYA JASPAR yes 110981796
chr18 56494868 56494884 NFYA JASPAR yes 42716182
chr18 56494868 56494884 NFYA JASPAR yes 110981797
chr18 56494871 56494886 NFYB JASPAR yes 42716183
chr18 56494871 56494886 NFYB JASPAR yes 110981798
chr18 56494873 56494878 NFY TRANSFAC yes 42716184
chr18 56494873 56494878 NFY TRANSFAC yes 110981799
chr18 56494877 56494881 H4TF2 TRANSFAC yes 42716185
chr18 56494877 56494881 H4TF2 TRANSFAC yes 110981800
chr18 56494889 56494907 NFYA JASPAR yes 42716186
chr18 56494889 56494907 NFYA JASPAR yes 110981801
chr18 56494892 56494908 NFYA JASPAR yes 42716187
chr18 56494892 56494908 NFYA JASPAR yes 110981802
chr18 56494895 56494910 NFYB JASPAR yes 42716188
chr18 56494895 56494910 NFYB JASPAR yes 110981803
chr18 56494897 56494902 NFY TRANSFAC yes 42716189
chr18 56494897 56494902 NFY TRANSFAC yes 110981804
chr18 56494901 56494905 H4TF2 TRANSFAC yes 42716190
chr18 56494901 56494905 H4TF2 TRANSFAC yes 110981805
chr18 56494905 56494909 YY1 TRANSFAC yes 42716191
chr18 56494905 56494909 YY1 TRANSFAC yes 110981806
chr18 56494913 56494931 NFYA JASPAR yes 42716192
chr18 56494913 56494931 NFYA JASPAR yes 110981807
chr18 56494916 56494932 NFYA JASPAR yes 42716193
chr18 56494916 56494932 NFYA JASPAR yes 110981808
chr18 56494918 56494928 EN2 JASPAR yes 42716194
chr18 56494918 56494928 EN2 JASPAR yes 110981809
chr18 56494919 56494934 NFYB JASPAR yes 42716195
chr18 56494919 56494934 NFYB JASPAR yes 110981810
chr18 56494921 56494926 NFY TRANSFAC yes 42716196
chr18 56494921 56494926 NFY TRANSFAC yes 110981811
chr18 56494938 56494956 NFYA JASPAR yes 42716197
chr18 56494938 56494956 NFYA JASPAR yes 110981812
chr18 56494941 56494957 NFYA JASPAR yes 42716198
chr18 56494941 56494957 NFYA JASPAR yes 110981813
chr18 56494944 56494959 NFYB JASPAR yes 42716199
chr18 56494944 56494959 NFYB JASPAR yes 110981814
chr18 56494946 56494951 NFY TRANSFAC yes 42716200
chr18 56494946 56494951 NFY TRANSFAC yes 110981815
chr18 56494954 56494958 YY1 TRANSFAC yes 42716201
chr18 56494954 56494958 YY1 TRANSFAC yes 110981816
chr18 56494979 56494994 MAFK JASPAR yes 42716202
chr18 56494979 56494994 MAFK JASPAR yes 110981817
chr18 56494979 56494997 NFYA JASPAR yes 42716203
chr18 56494979 56494997 NFYA JASPAR yes 110981818
chr18 56494982 56494998 NFYA JASPAR yes 42716204
chr18 56494982 56494998 NFYA JASPAR yes 110981819
chr18 56494985 56495000 NFYB JASPAR yes 42716205
chr18 56494985 56495000 NFYB JASPAR yes 110981820
chr18 56494987 56494992 NFY TRANSFAC yes 42716206
chr18 56494987 56494992 NFY TRANSFAC yes 110981821
chr18 56494995 56494999 YY1 TRANSFAC yes 42716207
chr18 56494995 56494999 YY1 TRANSFAC yes 110981822
chr18 56495023 56495034 CEBPA JASPAR yes 42716208
chr18 56495023 56495034 CEBPA JASPAR yes 110981823
chr18 56495028 56495046 TP63 JASPAR yes 42716209
chr18 56495028 56495046 TP63 JASPAR yes 110981824
chr18 56495029 56495044 TP53 JASPAR yes 42716210
chr18 56495029 56495044 TP53 JASPAR yes 110981825
chr18 56495034 56495040 MZF1 JASPAR yes 42716211
chr18 56495034 56495040 MZF1 JASPAR yes 110981826
chr18 56495063 56495069 NFE2 TRANSFAC yes 42716212
chr18 56495063 56495069 NFE2 TRANSFAC yes 110981827
chr18 56495064 56495078 GLIS2 JASPAR yes 42716213
chr18 56495064 56495078 GLIS3 JASPAR yes 42716214
chr18 56495064 56495078 GLIS2 JASPAR yes 110981828
chr18 56495064 56495078 GLIS3 JASPAR yes 110981829
chr18 56495067 56495080 TFAP2A JASPAR yes 42716215
chr18 56495067 56495080 TFAP2B JASPAR yes 42716216
chr18 56495067 56495080 TFAP2C JASPAR yes 42716217
chr18 56495067 56495080 TFAP2A JASPAR yes 110981830
chr18 56495067 56495080 TFAP2B JASPAR yes 110981831
chr18 56495067 56495080 TFAP2C JASPAR yes 110981832
chr18 56495069 56495079 GABPA JASPAR yes 42716218
chr18 56495069 56495079 GABPA JASPAR yes 110981833
chr18 56495071 56495077 ETS1 JASPAR yes 42716219
chr18 56495071 56495077 SPI1 JASPAR yes 42716220
chr18 56495071 56495077 ETS1 JASPAR yes 110981834
chr18 56495071 56495077 SPI1 JASPAR yes 110981835
chr18 56495078 56495087 ZEB1 JASPAR yes 42716221
chr18 56495078 56495087 ZEB1 JASPAR yes 110981836
chr18 56495081 56495102 REST JASPAR yes 42716222
chr18 56495081 56495102 REST JASPAR yes 110981837
chr18 56495092 56495103 NFKB1 JASPAR yes 42716223
chr18 56495092 56495103 NFKB1 JASPAR yes 110981838
SNP sites on vista27626[chr18:56494810-56495111]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56494822 rs4313892 G A no 5288171
chr18 56494827 rs115462832 C A,T no 5288172
chr18 56494868 rs35875784 A G
GCM2 MAFF MAFK NFYA NRL
5288173
chr18 56494924 rs181053482 T C
EN2 NFY NFYA NFYB
5288174
chr18 56495024 rs112143262 A C
CEBPA
5288175
chr18 56495072 rs55748133 C G,T
ETS1 GABPA GLIS2 GLIS3 SPI1 TFAP2A TFAP2B TFAP2C
5288176
chr18 56495080 rs542489612 A T
TFAP2A TFAP2B TFAP2C ZEB1
5288177
chr18 56495107 rs181536120 C T no 5288178
Genes possibly regulated by vista27626[chr18:56494810-56495111]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56529832 56653712 + ZNF532 ENSG00000074657.9 56529832 0.76 0.99 16614 65279
Expression level of Genes
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miRNAs possibly regulated by vista27626[chr18:56494810-56495111]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results