-
Home
- SNP
- rs542489612[chr18:56495080]
Enhancers that have rs542489612[chr18:56495080]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
56478445 |
56497875 |
enh17748 |
|
|
| chr18 |
56494810 |
56495111 |
vista27626 |
|
|
Transcript factors that have rs542489612[chr18:56495080]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
56494738
|
56495118
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108338655
|
|
|
chr18
|
56495067
|
56495080
|
TFAP2A
|
JASPAR
|
yes
|
|
42716215
|
|
|
chr18
|
56495067
|
56495080
|
TFAP2B
|
JASPAR
|
yes
|
|
42716216
|
|
|
chr18
|
56495067
|
56495080
|
TFAP2C
|
JASPAR
|
yes
|
|
42716217
|
|
|
chr18
|
56495067
|
56495080
|
TFAP2A
|
JASPAR
|
yes
|
|
110981830
|
|
|
chr18
|
56495067
|
56495080
|
TFAP2B
|
JASPAR
|
yes
|
|
110981831
|
|
|
chr18
|
56495067
|
56495080
|
TFAP2C
|
JASPAR
|
yes
|
|
110981832
|
|
|
chr18
|
56495078
|
56495087
|
ZEB1
|
JASPAR
|
yes
|
|
42716221
|
|
|
chr18
|
56495078
|
56495087
|
ZEB1
|
JASPAR
|
yes
|
|
110981836
|
|
Genes associated with rs542489612[chr18:56495080], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |