EnhancerDB
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  3. vista27634[chr18:56571979-56572200]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista27634[chr18:56571979-56572200]
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Tissue distribution of vista27634
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Transcription factor that possibly regulate vista27634[chr18:56571979-56572200]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr18 56571981 56572002 REST JASPAR yes 42716463
chr18 56571981 56572002 REST JASPAR yes 110989978
chr18 56572008 56572020 PBX1 JASPAR yes 42716464
chr18 56572008 56572020 PBX1 JASPAR yes 110989979
chr18 56572047 56572058 CEBPA JASPAR yes 42716465
chr18 56572047 56572058 CEBPA JASPAR yes 110989980
chr18 56572060 56572064 YY1 TRANSFAC yes 42716466
chr18 56572060 56572064 YY1 TRANSFAC yes 110989981
chr18 56572060 56572081 IRF1 JASPAR yes 42716467
chr18 56572060 56572081 IRF1 JASPAR yes 110989982
chr18 56572062 56572077 PRDM1 JASPAR yes 42716468
chr18 56572062 56572077 STAT2 JASPAR yes 42716469
chr18 56572062 56572077 PRDM1 JASPAR yes 110989983
chr18 56572062 56572077 STAT2 JASPAR yes 110989984
chr18 56572063 56572077 SPIC JASPAR yes 42716470
chr18 56572063 56572077 STAT1 JASPAR yes 42716471
chr18 56572063 56572077 SPIC JASPAR yes 110989985
chr18 56572063 56572077 STAT1 JASPAR yes 110989986
chr18 56572064 56572085 IRF1 JASPAR yes 42716472
chr18 56572064 56572085 IRF1 JASPAR yes 110989987
chr18 56572065 56572080 FOXP1 JASPAR yes 42716473
chr18 56572065 56572080 FOXP1 JASPAR yes 110989988
chr18 56572065 56572086 IRF1 JASPAR yes 42716474
chr18 56572065 56572086 IRF1 JASPAR yes 110989989
chr18 56572066 56572087 IRF1 JASPAR yes 42716475
chr18 56572066 56572087 IRF1 JASPAR yes 110989990
chr18 56572067 56572082 FOXP1 JASPAR yes 42716476
chr18 56572067 56572082 FOXP1 JASPAR yes 110989991
chr18 56572069 56572084 FOXP1 JASPAR yes 42716477
chr18 56572069 56572084 FOXP1 JASPAR yes 110989992
chr18 56572070 56572085 FOXP1 JASPAR yes 42716478
chr18 56572070 56572085 FOXP1 JASPAR yes 110989993
chr18 56572070 56572090 RREB1 JASPAR yes 42716479
chr18 56572070 56572090 RREB1 JASPAR yes 110989994
chr18 56572070 56572091 IRF1 JASPAR yes 42716480
chr18 56572070 56572091 IRF1 JASPAR yes 110989995
chr18 56572071 56572086 FOXP1 JASPAR yes 42716481
chr18 56572071 56572086 FOXP1 JASPAR yes 110989996
chr18 56572071 56572091 RREB1 JASPAR yes 42716482
chr18 56572071 56572091 RREB1 JASPAR yes 110989997
chr18 56572072 56572087 FOXP1 JASPAR yes 42716483
chr18 56572072 56572087 FOXP1 JASPAR yes 110989998
chr18 56572073 56572088 FOXP1 JASPAR yes 42716484
chr18 56572073 56572088 FOXP1 JASPAR yes 110989999
chr18 56572076 56572091 MEF2C JASPAR yes 42716485
chr18 56572076 56572091 MEF2C JASPAR yes 110990000
SNP sites on vista27634[chr18:56571979-56572200]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr18 56572053 rs193162236 T C
CEBPA
5288921
chr18 56572070 rs555976556 CT C
FOXP1 IRF1 PRDM1 RREB1 SPIC STAT1 STAT2
5288922
chr18 56572177 rs35160920 A T no 5288923
chr18 56572183 rs144609053 C T no 5288924
Genes possibly regulated by vista27634[chr18:56571979-56572200]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr18 56529832 56653712 + ZNF532 ENSG00000074657.9 56529832 0.76 0.99 16614 57853
Expression level of Genes
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miRNAs possibly regulated by vista27634[chr18:56571979-56572200]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results