-
Home
- SNP
- rs555976556[chr18:56572070]
Enhancers that have rs555976556[chr18:56572070]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr18 |
56565273 |
56572995 |
enh17751 |
|
|
| chr18 |
56571979 |
56572200 |
vista27634 |
|
|
Transcript factors that have rs555976556[chr18:56572070]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr18
|
56572027
|
56572688
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108338688
|
|
|
chr18
|
56572060
|
56572081
|
IRF1
|
JASPAR
|
yes
|
|
42716467
|
|
|
chr18
|
56572060
|
56572081
|
IRF1
|
JASPAR
|
yes
|
|
110989982
|
|
|
chr18
|
56572062
|
56572077
|
PRDM1
|
JASPAR
|
yes
|
|
42716468
|
|
|
chr18
|
56572062
|
56572077
|
STAT2
|
JASPAR
|
yes
|
|
42716469
|
|
|
chr18
|
56572062
|
56572077
|
PRDM1
|
JASPAR
|
yes
|
|
110989983
|
|
|
chr18
|
56572062
|
56572077
|
STAT2
|
JASPAR
|
yes
|
|
110989984
|
|
|
chr18
|
56572063
|
56572077
|
SPIC
|
JASPAR
|
yes
|
|
42716470
|
|
|
chr18
|
56572063
|
56572077
|
STAT1
|
JASPAR
|
yes
|
|
42716471
|
|
|
chr18
|
56572063
|
56572077
|
SPIC
|
JASPAR
|
yes
|
|
110989985
|
|
|
chr18
|
56572063
|
56572077
|
STAT1
|
JASPAR
|
yes
|
|
110989986
|
|
|
chr18
|
56572064
|
56572085
|
IRF1
|
JASPAR
|
yes
|
|
42716472
|
|
|
chr18
|
56572064
|
56572085
|
IRF1
|
JASPAR
|
yes
|
|
110989987
|
|
|
chr18
|
56572065
|
56572080
|
FOXP1
|
JASPAR
|
yes
|
|
42716473
|
|
|
chr18
|
56572065
|
56572080
|
FOXP1
|
JASPAR
|
yes
|
|
110989988
|
|
|
chr18
|
56572065
|
56572086
|
IRF1
|
JASPAR
|
yes
|
|
42716474
|
|
|
chr18
|
56572065
|
56572086
|
IRF1
|
JASPAR
|
yes
|
|
110989989
|
|
|
chr18
|
56572066
|
56572087
|
IRF1
|
JASPAR
|
yes
|
|
42716475
|
|
|
chr18
|
56572066
|
56572087
|
IRF1
|
JASPAR
|
yes
|
|
110989990
|
|
|
chr18
|
56572067
|
56572082
|
FOXP1
|
JASPAR
|
yes
|
|
42716476
|
|
|
chr18
|
56572067
|
56572082
|
FOXP1
|
JASPAR
|
yes
|
|
110989991
|
|
|
chr18
|
56572069
|
56572084
|
FOXP1
|
JASPAR
|
yes
|
|
42716477
|
|
|
chr18
|
56572069
|
56572084
|
FOXP1
|
JASPAR
|
yes
|
|
110989992
|
|
|
chr18
|
56572070
|
56572085
|
FOXP1
|
JASPAR
|
yes
|
|
42716478
|
|
|
chr18
|
56572070
|
56572085
|
FOXP1
|
JASPAR
|
yes
|
|
110989993
|
|
|
chr18
|
56572070
|
56572090
|
RREB1
|
JASPAR
|
yes
|
|
42716479
|
|
|
chr18
|
56572070
|
56572090
|
RREB1
|
JASPAR
|
yes
|
|
110989994
|
|
|
chr18
|
56572070
|
56572091
|
IRF1
|
JASPAR
|
yes
|
|
42716480
|
|
|
chr18
|
56572070
|
56572091
|
IRF1
|
JASPAR
|
yes
|
|
110989995
|
|
Genes associated with rs555976556[chr18:56572070], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |