EnhancerDB
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  3. vista28138[chr19:1140329-1140530]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28138[chr19:1140329-1140530]
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Tissue distribution of vista28138
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Transcription factor that possibly regulate vista28138[chr19:1140329-1140530]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1140329 1140339 CLOCK JASPAR yes 70778855
chr19 1140329 1140339 HEY1 JASPAR yes 70778856
chr19 1140329 1140339 HEY2 JASPAR yes 70778857
chr19 1140329 1140339 MAX JASPAR yes 70778858
chr19 1140329 1140339 MNT JASPAR yes 70778859
chr19 1140329 1140339 TFEB JASPAR yes 70778860
chr19 1140329 1140339 CLOCK JASPAR yes 111994335
chr19 1140329 1140339 HEY1 JASPAR yes 111994336
chr19 1140329 1140339 HEY2 JASPAR yes 111994337
chr19 1140329 1140339 MAX JASPAR yes 111994338
chr19 1140329 1140339 MNT JASPAR yes 111994339
chr19 1140329 1140339 TFEB JASPAR yes 111994340
chr19 1140329 1140340 USF1 JASPAR yes 70778861
chr19 1140329 1140340 USF1 JASPAR yes 111994341
chr19 1140330 1140337 USF1 JASPAR yes 70778862
chr19 1140330 1140337 USF1 JASPAR yes 111994342
chr19 1140330 1140340 MAX JASPAR yes 70778863
chr19 1140330 1140340 MAX JASPAR yes 111994343
chr19 1140331 1140336 MYC TRANSFAC yes 70778864
chr19 1140331 1140336 USF1 TRANSFAC yes 70778865
chr19 1140331 1140336 USF2 TRANSFAC yes 70778866
chr19 1140331 1140336 MYC TRANSFAC yes 111994344
chr19 1140331 1140336 USF1 TRANSFAC yes 111994345
chr19 1140331 1140336 USF2 TRANSFAC yes 111994346
chr19 1140351 1140360 ZEB1 JASPAR yes 70778867
chr19 1140351 1140360 ZEB1 JASPAR yes 111994347
chr19 1140354 1140359 USF2 TRANSFAC yes 70778868
chr19 1140354 1140359 USF2 TRANSFAC yes 111994348
chr19 1140364 1140379 ZIC3 JASPAR yes 70778869
chr19 1140364 1140379 ZIC4 JASPAR yes 70778870
chr19 1140364 1140379 ZIC3 JASPAR yes 111994349
chr19 1140364 1140379 ZIC4 JASPAR yes 111994350
chr19 1140365 1140379 GLIS2 JASPAR yes 70778871
chr19 1140365 1140379 ZIC1 JASPAR yes 70778872
chr19 1140365 1140379 GLIS2 JASPAR yes 111994351
chr19 1140365 1140379 ZIC1 JASPAR yes 111994352
chr19 1140373 1140378 SP1 TRANSFAC yes 70778873
chr19 1140373 1140378 SP1 TRANSFAC yes 111994353
chr19 1140397 1140408 FOSL2 JASPAR yes 70778874
chr19 1140397 1140408 FOSL2 JASPAR yes 111994354
chr19 1140401 1140407 YY1 JASPAR yes 70778875
chr19 1140401 1140407 YY1 JASPAR yes 111994355
chr19 1140429 1140435 YY1 JASPAR yes 70778876
chr19 1140429 1140435 YY1 JASPAR yes 111994356
chr19 1140430 1140444 TLX1 JASPAR yes 70778877
chr19 1140430 1140444 TLX1 JASPAR yes 111994357
chr19 1140431 1140445 TLX1 JASPAR yes 70778878
chr19 1140431 1140445 TLX1 JASPAR yes 111994358
chr19 1140433 1140444 E2F4 JASPAR yes 70778879
chr19 1140433 1140444 E2F4 JASPAR yes 111994359
chr19 1140433 1140447 E2F7 JASPAR yes 70778880
chr19 1140433 1140447 E2F7 JASPAR yes 111994360
chr19 1140434 1140445 E2F1 JASPAR yes 70778881
chr19 1140434 1140445 E2F1 JASPAR yes 111994361
chr19 1140434 1140446 E2F1 JASPAR yes 70778882
chr19 1140434 1140446 E2F1 JASPAR yes 111994362
chr19 1140449 1140459 ELK1 JASPAR yes 70778883
chr19 1140449 1140459 ELK1 JASPAR yes 111994363
chr19 1140453 1140459 ETS1 JASPAR yes 70778884
chr19 1140453 1140459 SPI1 JASPAR yes 70778885
chr19 1140453 1140459 ETS1 JASPAR yes 111994364
chr19 1140453 1140459 SPI1 JASPAR yes 111994365
chr19 1140455 1140476 ZNF263 JASPAR yes 70778886
chr19 1140455 1140476 ZNF263 JASPAR yes 111994366
chr19 1140466 1140484 ESR1 JASPAR yes 70778887
chr19 1140466 1140484 ESR1 JASPAR yes 111994367
chr19 1140470 1140480 ZNF740 JASPAR yes 70778888
chr19 1140470 1140480 ZNF740 JASPAR yes 111994368
chr19 1140476 1140481 SP1 TRANSFAC yes 70778889
chr19 1140476 1140481 SP1 TRANSFAC yes 111994369
chr19 1140480 1140490 SP1 JASPAR yes 70778890
chr19 1140480 1140490 SP1 JASPAR yes 111994370
chr19 1140481 1140489 EHF JASPAR yes 70778891
chr19 1140481 1140489 EHF JASPAR yes 111994371
chr19 1140481 1140496 TFAP2C JASPAR yes 70778892
chr19 1140481 1140496 TFAP2C JASPAR yes 111994372
chr19 1140485 1140494 TFAP2A JASPAR yes 70778893
chr19 1140485 1140494 TFAP2A JASPAR yes 111994373
chr19 1140512 1140516 LFA1 TRANSFAC yes 70778894
chr19 1140512 1140516 LFA1 TRANSFAC yes 111994374
chr19 1140524 1140529 MYC TRANSFAC yes 70778895
chr19 1140524 1140529 USF1 TRANSFAC yes 70778896
chr19 1140524 1140529 USF2 TRANSFAC yes 70778897
chr19 1140524 1140529 MYC TRANSFAC yes 111994375
chr19 1140524 1140529 USF1 TRANSFAC yes 111994376
chr19 1140524 1140529 USF2 TRANSFAC yes 111994377
SNP sites on vista28138[chr19:1140329-1140530]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1140371 rs562258656 C T
GLIS2 ZIC1 ZIC3 ZIC4
5372238
chr19 1140432 rs79829474 T C,G
TLX1 YY1
5372239
chr19 1140439 rs77672535 G A,C
E2F1 E2F4 E2F7 TLX1
5372240
chr19 1140441 rs111439494 G A
E2F1 E2F4 E2F7 TLX1
5372241
chr19 1140459 rs552054203 G C
ELK1 ETS1 SPI1 ZNF263
5372242
chr19 1140474 rs574978196 AG A
ESR1 ZNF263 ZNF740
5372243
chr19 1140491 rs146128898 G A
TFAP2A TFAP2C
5372244
Genes possibly regulated by vista28138[chr19:1140329-1140530]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1065922 1086627 + HMHA1 ENSG00000180448.6 1065922 0.89 1.0 16732 25593
chr19 1086594 1095598 - POLR2E ENSG00000099817.7 1095598 0.68 1.0 16733 55269
chr19 1103936 1106787 + GPX4 ENSG00000167468.12 1103936 0.68 1.0 16734 63607
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 0.75 1.0 16735 66248
chr19 1189406 1228428 + STK11 ENSG00000118046.10 1189406 0.59 1.0 16736 51124
chr19 1228286 1238026 - C19orf26 ENSG00000099625.8 1238026 0.92 1.0 16737 2504
Expression level of Genes
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miRNAs possibly regulated by vista28138[chr19:1140329-1140530]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results