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- rs562258656[chr19:1140371]
Enhancers that have rs562258656[chr19:1140371]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
1140018 |
1146899 |
enh89913 |
|
|
| chr19 |
1140329 |
1140530 |
vista28138 |
|
|
Transcript factors that have rs562258656[chr19:1140371]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
1140008
|
1141192
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108350403
|
|
|
chr19
|
1140183
|
1141348
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108350404
|
|
|
chr19
|
1140223
|
1140929
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108350405
|
|
|
chr19
|
1140254
|
1140863
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108350406
|
|
|
chr19
|
1140276
|
1141573
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108350407
|
|
|
chr19
|
1140364
|
1140379
|
ZIC3
|
JASPAR
|
yes
|
|
70778869
|
|
|
chr19
|
1140364
|
1140379
|
ZIC4
|
JASPAR
|
yes
|
|
70778870
|
|
|
chr19
|
1140364
|
1140379
|
ZIC3
|
JASPAR
|
yes
|
|
111994349
|
|
|
chr19
|
1140364
|
1140379
|
ZIC4
|
JASPAR
|
yes
|
|
111994350
|
|
|
chr19
|
1140365
|
1140379
|
GLIS2
|
JASPAR
|
yes
|
|
70778871
|
|
|
chr19
|
1140365
|
1140379
|
ZIC1
|
JASPAR
|
yes
|
|
70778872
|
|
|
chr19
|
1140365
|
1140379
|
GLIS2
|
JASPAR
|
yes
|
|
111994351
|
|
|
chr19
|
1140365
|
1140379
|
ZIC1
|
JASPAR
|
yes
|
|
111994352
|
|
Genes associated with rs562258656[chr19:1140371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |