EnhancerDB
  1. Home
  2. Enhancers
  3. vista28222[chr19:2494705-2495117]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28222[chr19:2494705-2495117]
Back to top
Tissue distribution of vista28222
Back to top
Transcription factor that possibly regulate vista28222[chr19:2494705-2495117]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2494401 2495715 POLR2A UCSC Txn Factor no Conserved 108360534
chr19 2494841 2495199 PHF8 UCSC Txn Factor no Conserved 108360618
chr19 2494695 2494710 ZBTB33 JASPAR yes 70783332
chr19 2494695 2494710 ZBTB33 JASPAR yes 112066427
chr19 2494706 2494720 MTF1 JASPAR yes 70783333
chr19 2494706 2494720 MTF1 JASPAR yes 112066428
chr19 2494721 2494731 ZNF740 JASPAR yes 70783334
chr19 2494721 2494731 ZNF740 JASPAR yes 112066429
chr19 2494742 2494753 NRF1 JASPAR yes 70783335
chr19 2494742 2494753 NRF1 JASPAR yes 112066430
chr19 2494743 2494747 LFA1 TRANSFAC yes 70783336
chr19 2494743 2494747 LFA1 TRANSFAC yes 112066431
chr19 2494748 2494763 IRF9 JASPAR yes 70783337
chr19 2494748 2494763 IRF9 JASPAR yes 112066432
chr19 2494813 2494825 HINFP JASPAR yes 70783338
chr19 2494813 2494825 HINFP JASPAR yes 112066433
chr19 2494817 2494827 SP1 JASPAR yes 70783339
chr19 2494817 2494827 SP1 JASPAR yes 112066434
chr19 2494818 2494828 SP1 JASPAR yes 70783340
chr19 2494818 2494828 SP1 JASPAR yes 112066435
chr19 2494820 2494825 SP1 TRANSFAC yes 70783341
chr19 2494820 2494825 SP1 TRANSFAC yes 112066436
chr19 2494824 2494841 RXRA JASPAR yes 70783342
chr19 2494824 2494841 RXRA JASPAR yes 112066437
chr19 2494825 2494829 ESR1 TRANSFAC yes 70783343
chr19 2494825 2494829 ESR1 TRANSFAC yes 112066438
chr19 2494832 2494843 E2F1 JASPAR yes 70783344
chr19 2494832 2494843 E2F1 JASPAR yes 112066439
chr19 2494833 2494844 E2F4 JASPAR yes 70783345
chr19 2494833 2494844 E2F6 JASPAR yes 70783346
chr19 2494833 2494844 E2F4 JASPAR yes 112066440
chr19 2494833 2494844 E2F6 JASPAR yes 112066441
chr19 2494843 2494848 SP1 TRANSFAC yes 70783347
chr19 2494843 2494848 SP1 TRANSFAC yes 112066442
chr19 2494845 2494854 SP1 TRANSFAC yes 70783348
chr19 2494845 2494854 SP1 TRANSFAC yes 112066443
chr19 2494845 2494864 PAX5 JASPAR yes 70783349
chr19 2494845 2494864 PAX5 JASPAR yes 112066444
chr19 2494846 2494852 SP1 TRANSFAC yes 70783350
chr19 2494846 2494852 SP1 TRANSFAC yes 112066445
chr19 2494846 2494856 SP1 JASPAR yes 70783351
chr19 2494846 2494856 SP1 JASPAR yes 112066446
chr19 2494847 2494854 SP1 TRANSFAC yes 70783352
chr19 2494847 2494854 SP1 TRANSFAC yes 112066447
chr19 2494848 2494853 SP1 TRANSFAC yes 70783353
chr19 2494848 2494853 SP1 TRANSFAC yes 112066448
chr19 2494848 2494854 SP1 TRANSFAC yes 70783354
chr19 2494848 2494854 SP1 TRANSFAC yes 112066449
chr19 2494864 2494876 ELF1 JASPAR yes 70783355
chr19 2494864 2494876 ELF1 JASPAR yes 112066450
chr19 2494866 2494876 GABPA JASPAR yes 70783356
chr19 2494866 2494876 GABPA JASPAR yes 112066451
chr19 2494868 2494874 ETS1 JASPAR yes 70783357
chr19 2494868 2494874 SPI1 JASPAR yes 70783358
chr19 2494868 2494874 ETS1 JASPAR yes 112066452
chr19 2494868 2494874 SPI1 JASPAR yes 112066453
chr19 2494872 2494888 GLIS1 JASPAR yes 70783359
chr19 2494872 2494888 GLIS1 JASPAR yes 112066454
chr19 2494883 2494888 SP1 TRANSFAC yes 70783360
chr19 2494883 2494888 SP1 TRANSFAC yes 112066455
chr19 2494892 2494900 CREB1 JASPAR yes 70783361
chr19 2494892 2494900 CREB1 JASPAR yes 112066456
chr19 2494912 2494917 SP1 TRANSFAC yes 70783362
chr19 2494912 2494917 SP1 TRANSFAC yes 112066457
chr19 2494926 2494931 SP1 TRANSFAC yes 70783363
chr19 2494926 2494931 SP1 TRANSFAC yes 112066458
chr19 2494926 2494933 SP1 TRANSFAC yes 70783364
chr19 2494926 2494933 SP1 TRANSFAC yes 112066459
chr19 2494931 2494941 RELA JASPAR yes 70783365
chr19 2494931 2494941 RELA JASPAR yes 112066460
chr19 2494931 2494942 NFKB1 JASPAR yes 70783366
chr19 2494931 2494942 NFKB1 JASPAR yes 112066461
chr19 2494951 2494956 SP1 TRANSFAC yes 70783367
chr19 2494951 2494956 SP1 TRANSFAC yes 112066462
chr19 2495004 2495009 TFAP2A TRANSFAC yes 70783368
chr19 2495004 2495009 TFAP2A TRANSFAC yes 112066463
chr19 2495004 2495010 MZF1 JASPAR yes 70783369
chr19 2495004 2495010 MZF1 JASPAR yes 112066464
chr19 2495005 2495020 JUND JASPAR yes 70783370
chr19 2495005 2495020 JUND JASPAR yes 112066465
chr19 2495007 2495021 ATF7 JASPAR yes 70783371
chr19 2495007 2495021 BATF3 JASPAR yes 70783372
chr19 2495007 2495021 ATF7 JASPAR yes 112066466
chr19 2495007 2495021 BATF3 JASPAR yes 112066467
chr19 2495008 2495020 JDP2 JASPAR yes 70783373
chr19 2495008 2495020 JDP2 JASPAR yes 112066468
chr19 2495008 2495021 ATF4 JASPAR yes 70783374
chr19 2495008 2495021 ATF4 JASPAR yes 112066469
chr19 2495008 2495023 JUND JASPAR yes 70783375
chr19 2495008 2495023 JUND JASPAR yes 112066470
chr19 2495009 2495022 JUN JASPAR yes 70783376
chr19 2495009 2495022 JUN JASPAR yes 112066471
chr19 2495010 2495017 JUN TRANSFAC yes 70783377
chr19 2495010 2495017 JUN TRANSFAC yes 112066472
chr19 2495043 2495048 SP1 TRANSFAC yes 70783378
chr19 2495043 2495048 SP1 TRANSFAC yes 112066473
chr19 2495044 2495049 SP1 TRANSFAC yes 70783379
chr19 2495044 2495049 SP1 TRANSFAC yes 112066474
chr19 2495046 2495056 SP1 JASPAR yes 70783380
chr19 2495046 2495056 SP1 JASPAR yes 112066475
chr19 2495091 2495097 NFIC JASPAR yes 70783381
chr19 2495091 2495097 NFIC JASPAR yes 112066476
SNP sites on vista28222[chr19:2494705-2495117]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2494756 rs557481766 G A
IRF9 POLR2A
5384842
chr19 2494774 rs148728599 CGCGGAGG C
POLR2A
5384843
chr19 2494801 rs554770064 G A
POLR2A
5384844
chr19 2494852 rs573063421 C G
PAX5 PHF8 POLR2A SP1
5384845
chr19 2494912 rs540473548 T C
PHF8 POLR2A SP1
5384846
chr19 2494916 rs535365279 G T
PHF8 POLR2A SP1
5384847
chr19 2494922 rs576760688 G A
PHF8 POLR2A
5384848
chr19 2494969 rs543935706 G A
PHF8 POLR2A
5384849
chr19 2494986 rs4267454 A G
PHF8 POLR2A
5384850
chr19 2495058 rs542829826 C G
PHF8 POLR2A
5384851
chr19 2495093 rs138626166 G C
NFIC PHF8 POLR2A
5384852
Genes possibly regulated by vista28222[chr19:2494705-2495117]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2425622 2427892 - TIMM13 ENSG00000099800.3 2427892 0.71 1.0 16783 33187
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 62289
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 81415
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28222[chr19:2494705-2495117]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results