EnhancerDB
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  3. rs540473548[chr19:2494912]
Enhancers that have rs540473548[chr19:2494912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2481141 2509475 enh4958
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr19 2494705 2495117 vista28222
VISTA
Transcript factors that have rs540473548[chr19:2494912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2493500 2495679 ZBTB33 GTRD no Lung (A549) 108360455
chr19 2493534 2495622 ZBTB33 GTRD no Lung (A549) 108360456
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 21835645
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360457
chr19 2493553 2496728 ZNF274 GTRD no Cervix (HeLa-S3) 108360458
chr19 2493608 2495632 ZBTB33 GTRD no Lung (A549) 108360459
chr19 2493689 2495889 ZBTB33 GTRD no Lung (A549) 108360461
chr19 2493689 2495889 ZBTB33 GTRD no Lung (A549) 108360462
chr19 2493814 2495424 ZBTB33 GTRD no Lung (A549) 108360463
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360464
chr19 2493877 2496024 TCF7L2 GTRD no Colon (HCT116) 108360465
chr19 2493888 2495459 ZNF274 GTRD no Liver (HepG2) 21835646
chr19 2493888 2495459 ZNF274 GTRD no Liver (HepG2) 108360466
chr19 2493890 2495406 ZNF274 GTRD no Bone Marrow (K562) 21835647
chr19 2493890 2495406 ZNF274 GTRD no Bone Marrow (K562) 108360467
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360468
chr19 2493902 2496299 TCF7L2 GTRD no Colon (HCT116) 108360469
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360470
chr19 2493915 2496279 TCF7L2 GTRD no Colon (HCT116) 108360471
chr19 2493933 2495825 ZBTB33 GTRD no Lung (A549) 108360472
chr19 2493933 2495825 ZBTB33 GTRD no Lung (A549) 108360473
chr19 2493950 2495609 ZNF143 GTRD no Epithelial (MCF-7) 21835648
chr19 2493950 2495609 ZNF143 GTRD no Epithelial (MCF-7) 108360474
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360475
chr19 2493953 2496192 TCF7L2 GTRD no Colon (HCT116) 108360476
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360477
chr19 2493968 2496356 TCF7L2 GTRD no Colon (HCT116) 108360478
chr19 2493974 2495627 ZBTB33 GTRD no Lung (A549) 108360479
chr19 2493980 2495614 ZBTB33 GTRD no Lung (A549) 108360480
chr19 2493987 2495710 ZNF143 GTRD no Epithelial (MCF-7) 21835649
chr19 2493987 2495710 ZNF143 GTRD no Epithelial (MCF-7) 108360481
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360482
chr19 2493992 2496814 ZNF274 GTRD no Blood (GM12878) 108360483
chr19 2494013 2495219 ZBTB33 GTRD no Brain (SK-N-SH) 108360484
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360485
chr19 2494032 2496113 TCF7L2 GTRD no Colon (HCT116) 108360486
chr19 2494035 2495224 ZNF274 GTRD no Liver (HepG2) 21835650
chr19 2494035 2495224 ZNF274 GTRD no Liver (HepG2) 108360487
chr19 2494050 2495293 ZBTB33 GTRD no Lung (A549) 108360488
chr19 2494055 2495496 ZBTB33 GTRD no Lung (A549) 108360489
chr19 2494058 2495694 ZNF274 GTRD no Blood (GM12878) 108360490
chr19 2494064 2495290 ZNF274 GTRD no Liver (HepG2) 21835652
chr19 2494064 2495290 ZNF274 GTRD no Liver (HepG2) 108360491
chr19 2494064 2495501 ZNF274 GTRD no Bone Marrow (K562) 21835653
chr19 2494064 2495501 ZNF274 GTRD no Bone Marrow (K562) 108360492
chr19 2494065 2495094 ZBTB33 GTRD no Lung (A549) 108360493
chr19 2494070 2495168 ZBTB33 GTRD no Lung (A549) 108360494
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 21835654
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360495
chr19 2494088 2496193 ZNF143 GTRD no Epithelial (MCF-7) 108360496
chr19 2494094 2495678 ZNF274 GTRD no Blood (GM12878) 108360497
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360498
chr19 2494094 2496160 ZBTB33 GTRD no Brain (SK-N-SH) 108360499
chr19 2494111 2495350 ZBTB33 GTRD no Lung (A549) 108360500
chr19 2494131 2495092 ZNF143 GTRD no Epithelial (MCF-7) 21835656
chr19 2494131 2495092 ZNF143 GTRD no Epithelial (MCF-7) 108360503
chr19 2494141 2495392 ZNF274 GTRD no Bone Marrow (K562) 21835657
chr19 2494141 2495392 ZNF274 GTRD no Bone Marrow (K562) 108360504
chr19 2494143 2495256 ZNF274 GTRD no Liver (HepG2) 21835658
chr19 2494143 2495256 ZNF274 GTRD no Liver (HepG2) 108360505
chr19 2494144 2495587 ZBTB33 GTRD no Lung (A549) 108360506
chr19 2494148 2495546 ZNF274 GTRD no Cervix (HeLa-S3) 21835660
chr19 2494148 2495546 ZNF274 GTRD no Cervix (HeLa-S3) 108360507
chr19 2494193 2495667 ZNF274 GTRD no Blood (GM12878) 108360509
chr19 2494201 2495269 ZBTB33 GTRD no Lung (A549) 108360511
chr19 2494218 2494953 ZNF274 GTRD no Blood (GM12878) 108360512
chr19 2494233 2495767 ZNF143 GTRD no Epithelial (MCF-7) 21835661
chr19 2494233 2495767 ZNF143 GTRD no Epithelial (MCF-7) 108360513
chr19 2494251 2495778 ZNF274 GTRD no Blood (GM12878) 108360514
chr19 2494254 2495863 TCF7L2 GTRD no Colon (HCT116) 108360515
chr19 2494254 2495863 TCF7L2 GTRD no Colon (HCT116) 108360516
chr19 2494281 2495625 ZNF143 GTRD no Epithelial (MCF-7) 21835662
chr19 2494281 2495625 ZNF143 GTRD no Epithelial (MCF-7) 108360517
chr19 2494283 2494970 ZNF274 GTRD no Blood (GM12878) 108360519
chr19 2494296 2495740 ZNF274 GTRD no Cervix (HeLa-S3) 21835665
chr19 2494296 2495740 ZNF274 GTRD no Cervix (HeLa-S3) 108360520
chr19 2494297 2495250 ZNF274 GTRD no Blood (GM12878) 108360521
chr19 2494298 2494958 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108360522
chr19 2494303 2495138 ZBTB33 GTRD no Brain (SK-N-SH) 108360523
chr19 2494309 2495443 ZNF274 GTRD no Bone Marrow (K562) 21835666
chr19 2494309 2495443 ZNF274 GTRD no Bone Marrow (K562) 108360524
chr19 2494334 2495472 ZNF274 GTRD no Liver (HepG2) 21835667
chr19 2494334 2495472 ZNF274 GTRD no Liver (HepG2) 108360525
chr19 2494339 2495219 ZNF274 GTRD no Blood (GM12878) 108360526
chr19 2494355 2495335 TCF7L2 GTRD no Colon (HCT116) 108360528
chr19 2494369 2495441 ZNF274 GTRD no Bone Marrow (K562) 21835669
chr19 2494369 2495441 ZNF274 GTRD no Bone Marrow (K562) 108360529
chr19 2494382 2495168 ZNF274 GTRD no Liver (HepG2) 21835671
chr19 2494382 2495168 ZNF274 GTRD no Liver (HepG2) 108360532
chr19 2494382 2495352 ZNF274 GTRD no Blood (GM12878) 108360533
chr19 2494401 2495715 POLR2A UCSC Txn Factor no Conserved 108360534
chr19 2494415 2495775 ZNF274 GTRD no Bone Marrow (K562) 21835673
chr19 2494415 2495775 ZNF274 GTRD no Bone Marrow (K562) 108360536
chr19 2494417 2495361 ZNF274 GTRD no Blood (GM12878) 108360537
chr19 2494423 2495092 ZNF274 GTRD no Blood (GM12878) 108360538
chr19 2494424 2495113 ZNF274 GTRD no Liver (HepG2) 21835674
chr19 2494424 2495113 ZNF274 GTRD no Liver (HepG2) 108360539
chr19 2494424 2495245 ZNF274 GTRD no Bone Marrow (K562) 21835675
chr19 2494424 2495245 ZNF274 GTRD no Bone Marrow (K562) 108360540
chr19 2494424 2495712 ZNF143 GTRD no Epithelial (MCF-7) 21835676
chr19 2494424 2495712 ZNF143 GTRD no Epithelial (MCF-7) 108360541
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 21835677
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 108360542
chr19 2494425 2495877 ZNF143 GTRD no Epithelial (MCF-7) 108360543
chr19 2494430 2495416 ZNF274 GTRD no Blood (GM12878) 108360544
chr19 2494432 2495882 TCF7L2 GTRD no Colon (HCT116) 108360545
chr19 2494432 2495882 TCF7L2 GTRD no Colon (HCT116) 108360546
chr19 2494434 2495275 ZNF274 GTRD no Bone Marrow (K562) 21835678
chr19 2494434 2495275 ZNF274 GTRD no Bone Marrow (K562) 108360547
chr19 2494444 2495206 ZNF274 GTRD no Blood (GM12878) 108360548
chr19 2494444 2495380 ZBTB33 GTRD no Lung (A549) 108360549
chr19 2494448 2495051 ZNF274 GTRD no Blood (GM12878) 108360551
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360552
chr19 2494450 2496024 ZBTB33 GTRD no Brain (SK-N-SH) 108360553
chr19 2494461 2495432 ZNF274 GTRD no Blood (GM12878) 108360554
chr19 2494467 2495436 ZNF274 GTRD no Bone Marrow (K562) 21835680
chr19 2494467 2495436 ZNF274 GTRD no Bone Marrow (K562) 108360555
chr19 2494468 2494953 ZNF274 GTRD no Liver (HepG2) 21835681
chr19 2494468 2494953 ZNF274 GTRD no Liver (HepG2) 108360556
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360557
chr19 2494474 2495974 ZNF274 GTRD no Blood (GM12878) 108360558
chr19 2494476 2495435 ZNF274 GTRD no Blood (GM12878) 108360559
chr19 2494484 2495461 ZNF274 GTRD no Liver (HepG2) 21835683
chr19 2494484 2495461 ZNF274 GTRD no Liver (HepG2) 108360561
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360562
chr19 2494492 2496222 TCF7L2 GTRD no Colon (HCT116) 108360563
chr19 2494495 2495727 ZNF274 GTRD no Bone Marrow (K562) 21835684
chr19 2494495 2495727 ZNF274 GTRD no Bone Marrow (K562) 108360564
chr19 2494519 2495382 TCF7L2 GTRD no Colon (HCT116) 108360566
chr19 2494523 2495389 ZNF274 GTRD no Blood (GM12878) 108360567
chr19 2494532 2494990 ZNF274 GTRD no Liver (HepG2) 21835685
chr19 2494532 2494990 ZNF274 GTRD no Liver (HepG2) 108360568
chr19 2494533 2495764 ZNF143 GTRD no Epithelial (MCF-7) 21835686
chr19 2494533 2495764 ZNF143 GTRD no Epithelial (MCF-7) 108360569
chr19 2494549 2495053 CTCF GTRD no Spleen 21835687
chr19 2494549 2495053 CTCF GTRD no Spleen 108360570
chr19 2494553 2495387 ZNF274 GTRD no Blood (GM12878) 108360571
chr19 2494562 2495208 TCF7L2 GTRD no Colon (HCT116) 108360572
chr19 2494564 2495285 ZNF274 GTRD no Bone Marrow (K562) 21835688
chr19 2494564 2495285 ZNF274 GTRD no Bone Marrow (K562) 108360573
chr19 2494565 2495311 ZNF274 GTRD no Bone Marrow (K562) 21835689
chr19 2494565 2495311 ZNF274 GTRD no Bone Marrow (K562) 108360574
chr19 2494570 2495573 TCF7L2 GTRD no Colon (HCT116) 108360575
chr19 2494603 2495133 ZNF274 GTRD no Liver (HepG2) 21835690
chr19 2494603 2495133 ZNF274 GTRD no Liver (HepG2) 108360576
chr19 2494605 2495442 ZNF274 GTRD no Blood (GM12878) 108360577
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 21835691
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 108360578
chr19 2494609 2495867 ZNF274 GTRD no Bone Marrow (K562) 108360579
chr19 2494611 2495189 ZNF274 GTRD no Liver (HepG2) 21835692
chr19 2494611 2495189 ZNF274 GTRD no Liver (HepG2) 108360580
chr19 2494619 2495039 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21835693
chr19 2494619 2495039 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108360581
chr19 2494628 2495053 TCF7L2 GTRD no Colon (HCT116) 108360582
chr19 2494630 2495289 ZNF274 GTRD no Bone Marrow (K562) 21835694
chr19 2494630 2495289 ZNF274 GTRD no Bone Marrow (K562) 108360583
chr19 2494643 2495299 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21835695
chr19 2494643 2495299 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108360584
chr19 2494655 2494971 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21835696
chr19 2494655 2494971 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108360585
chr19 2494667 2495123 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835697
chr19 2494667 2495123 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108360586
chr19 2494671 2495177 ZNF274 GTRD no Bone Marrow (K562) 21835698
chr19 2494671 2495177 ZNF274 GTRD no Bone Marrow (K562) 108360587
chr19 2494684 2495020 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108360588
chr19 2494695 2495131 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108360589
chr19 2494714 2495070 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108360590
chr19 2494722 2494998 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21835699
chr19 2494722 2494998 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108360591
chr19 2494728 2495108 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835700
chr19 2494728 2495108 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108360592
chr19 2494733 2495043 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108360593
chr19 2494736 2495345 ZNF274 GTRD no Bone Marrow (K562) 21835701
chr19 2494736 2495345 ZNF274 GTRD no Bone Marrow (K562) 108360594
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 21835702
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360595
chr19 2494746 2496306 ZNF274 GTRD no Cervix (HeLa-S3) 108360596
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 21835703
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360597
chr19 2494749 2496165 ZNF274 GTRD no Cervix (HeLa-S3) 108360598
chr19 2494750 2494958 ZNF274 GTRD no Bone Marrow (K562) 21835704
chr19 2494750 2494958 ZNF274 GTRD no Bone Marrow (K562) 108360599
chr19 2494759 2495030 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108360600
chr19 2494765 2495255 ZNF274 GTRD no Bone Marrow (K562) 21835705
chr19 2494765 2495255 ZNF274 GTRD no Bone Marrow (K562) 108360601
chr19 2494767 2495930 ZBTB33 GTRD no Brain (SK-N-SH) 108360602
chr19 2494767 2495930 ZBTB33 GTRD no Brain (SK-N-SH) 108360603
chr19 2494781 2495137 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108360604
chr19 2494786 2495156 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835706
chr19 2494786 2495156 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108360605
chr19 2494791 2495161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835707
chr19 2494791 2495161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108360606
chr19 2494796 2494941 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835708
chr19 2494796 2494941 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108360607
chr19 2494797 2495127 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108360608
chr19 2494801 2495081 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108360609
chr19 2494804 2495260 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835709
chr19 2494804 2495260 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108360610
chr19 2494808 2495138 ZNF274 GTRD no Bone Marrow (K562) 21835710
chr19 2494808 2495138 ZNF274 GTRD no Bone Marrow (K562) 108360611
chr19 2494809 2495266 ZNF274 GTRD no Bone Marrow (K562) 21835711
chr19 2494809 2495266 ZNF274 GTRD no Bone Marrow (K562) 108360612
chr19 2494809 2495302 ZNF274 GTRD no Bone Marrow (K562) 21835712
chr19 2494809 2495302 ZNF274 GTRD no Bone Marrow (K562) 108360613
chr19 2494815 2495255 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108360614
chr19 2494824 2495717 ZNF274 GTRD no Cervix (HeLa-S3) 21835713
chr19 2494824 2495717 ZNF274 GTRD no Cervix (HeLa-S3) 108360615
chr19 2494826 2495136 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835714
chr19 2494826 2495136 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108360616
chr19 2494834 2495669 ZBTB33 GTRD no Brain (SK-N-SH) 108360617
chr19 2494841 2495199 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835715
chr19 2494841 2495199 PHF8 UCSC Txn Factor no Conserved 108360618
chr19 2494841 2495199 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108360619
chr19 2494857 2495349 ZNF274 GTRD no Bone Marrow (K562) 21835716
chr19 2494857 2495349 ZNF274 GTRD no Bone Marrow (K562) 108360620
chr19 2494862 2495185 ZNF274 GTRD no Cervix (HeLa-S3) 21835717
chr19 2494862 2495185 ZNF274 GTRD no Cervix (HeLa-S3) 108360621
chr19 2494862 2495621 ZBTB33 GTRD no Lung (A549) 108360622
chr19 2494865 2495129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21835718
chr19 2494865 2495129 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108360623
chr19 2494885 2495165 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21835719
chr19 2494885 2495165 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108360624
chr19 2494897 2495531 ZNF143 GTRD no Epithelial (MCF-7) 21835720
chr19 2494897 2495531 ZNF143 GTRD no Epithelial (MCF-7) 108360625
chr19 2494897 2495541 ZNF143 GTRD no Epithelial (MCF-7) 21835721
chr19 2494897 2495541 ZNF143 GTRD no Epithelial (MCF-7) 108360626
chr19 2494900 2495401 ZNF274 GTRD no Cervix (HeLa-S3) 21835722
chr19 2494900 2495401 ZNF274 GTRD no Cervix (HeLa-S3) 108360627
chr19 2494908 2495676 ZBTB33 GTRD no Lung (A549) 108360628
chr19 2494912 2494917 SP1 TRANSFAC yes 70783362
chr19 2494912 2494917 SP1 TRANSFAC yes 112066457
Genes associated with rs540473548[chr19:2494912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More