EnhancerDB
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  3. vista28232[chr19:2545643-2546037]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28232[chr19:2545643-2546037]
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Tissue distribution of vista28232
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Transcription factor that possibly regulate vista28232[chr19:2545643-2546037]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2545625 2545646 IRF1 JASPAR yes 70783808
chr19 2545625 2545646 IRF1 JASPAR yes 112072591
chr19 2545629 2545647 IRF2 JASPAR yes 70783809
chr19 2545629 2545647 IRF2 JASPAR yes 112072593
chr19 2545640 2545644 NFE TRANSFAC yes 70783810
chr19 2545640 2545644 NFE TRANSFAC yes 112072594
chr19 2545644 2545659 FOXP1 JASPAR yes 70783811
chr19 2545644 2545659 FOXP1 JASPAR yes 112072595
chr19 2545645 2545660 FOXP1 JASPAR yes 70783812
chr19 2545645 2545660 FOXP1 JASPAR yes 112072596
chr19 2545646 2545652 TBP TRANSFAC yes 70783813
chr19 2545646 2545652 TBP TRANSFAC yes 112072597
chr19 2545646 2545661 FOXP1 JASPAR yes 70783814
chr19 2545646 2545661 FOXP1 JASPAR yes 112072598
chr19 2545646 2545667 IRF1 JASPAR yes 70783815
chr19 2545646 2545667 IRF1 JASPAR yes 112072599
chr19 2545647 2545662 FOXP1 JASPAR yes 70783816
chr19 2545647 2545662 FOXP1 JASPAR yes 112072600
chr19 2545647 2545668 IRF1 JASPAR yes 70783817
chr19 2545647 2545668 IRF1 JASPAR yes 112072601
chr19 2545648 2545663 FOXP1 JASPAR yes 70783818
chr19 2545648 2545663 FOXP1 JASPAR yes 112072602
chr19 2545648 2545669 IRF1 JASPAR yes 70783819
chr19 2545648 2545669 IRF1 JASPAR yes 112072603
chr19 2545649 2545664 FOXP1 JASPAR yes 70783820
chr19 2545649 2545664 FOXP1 JASPAR yes 112072604
chr19 2545649 2545670 IRF1 JASPAR yes 70783821
chr19 2545649 2545670 IRF1 JASPAR yes 112072605
chr19 2545650 2545665 FOXP1 JASPAR yes 70783822
chr19 2545650 2545665 FOXP1 JASPAR yes 112072606
chr19 2545650 2545671 IRF1 JASPAR yes 70783823
chr19 2545650 2545671 IRF1 JASPAR yes 112072607
chr19 2545651 2545666 FOXP1 JASPAR yes 70783824
chr19 2545651 2545666 FOXP1 JASPAR yes 112072608
chr19 2545651 2545672 IRF1 JASPAR yes 70783825
chr19 2545651 2545672 IRF1 JASPAR yes 112072609
chr19 2545652 2545667 FOXP1 JASPAR yes 70783826
chr19 2545652 2545667 FOXP1 JASPAR yes 112072610
chr19 2545652 2545673 IRF1 JASPAR yes 70783827
chr19 2545652 2545673 IRF1 JASPAR yes 112072611
chr19 2545653 2545668 FOXP1 JASPAR yes 70783828
chr19 2545653 2545668 FOXP1 JASPAR yes 112072612
chr19 2545654 2545669 FOXP1 JASPAR yes 70783829
chr19 2545654 2545669 FOXP1 JASPAR yes 112072613
chr19 2545654 2545675 IRF1 JASPAR yes 70783830
chr19 2545654 2545675 IRF1 JASPAR yes 112072614
chr19 2545655 2545670 FOXP1 JASPAR yes 70783831
chr19 2545655 2545670 FOXP1 JASPAR yes 112072615
chr19 2545656 2545671 FOXP1 JASPAR yes 70783832
chr19 2545656 2545671 FOXP1 JASPAR yes 112072616
chr19 2545670 2545680 ID4 JASPAR yes 70783833
chr19 2545670 2545680 TCF4 JASPAR yes 70783834
chr19 2545670 2545680 ID4 JASPAR yes 112072617
chr19 2545670 2545680 TCF4 JASPAR yes 112072618
chr19 2545678 2545689 FOSL2 JASPAR yes 70783835
chr19 2545678 2545689 FOSL2 JASPAR yes 112072619
chr19 2545719 2545724 SP1 TRANSFAC yes 70783836
chr19 2545719 2545724 SP1 TRANSFAC yes 112072620
chr19 2545722 2545735 NFKB1 JASPAR yes 70783837
chr19 2545722 2545735 NFKB1 JASPAR yes 112072621
chr19 2545724 2545730 ZNF354C JASPAR yes 70783838
chr19 2545724 2545730 ZNF354C JASPAR yes 112072622
chr19 2545727 2545738 USF1 JASPAR yes 70783839
chr19 2545727 2545738 USF2 JASPAR yes 70783840
chr19 2545727 2545738 USF1 JASPAR yes 112072623
chr19 2545727 2545738 USF2 JASPAR yes 112072624
chr19 2545728 2545738 SREBF2 JASPAR yes 70783841
chr19 2545728 2545738 SREBF2 JASPAR yes 112072625
chr19 2545730 2545735 USF2 TRANSFAC yes 70783842
chr19 2545730 2545735 USF2 TRANSFAC yes 112072626
chr19 2545768 2545781 NFKB1 JASPAR yes 70783843
chr19 2545768 2545781 NFKB2 JASPAR yes 70783844
chr19 2545768 2545781 NFKB1 JASPAR yes 112072627
chr19 2545768 2545781 NFKB2 JASPAR yes 112072628
chr19 2545784 2545799 MEF2C JASPAR yes 70783845
chr19 2545784 2545799 MEF2C JASPAR yes 112072629
chr19 2545785 2545800 MEF2A JASPAR yes 70783846
chr19 2545785 2545800 MEF2A JASPAR yes 112072630
chr19 2545786 2545798 MEF2A JASPAR yes 70783847
chr19 2545786 2545798 MEF2B JASPAR yes 70783848
chr19 2545786 2545798 MEF2D JASPAR yes 70783849
chr19 2545786 2545798 MEF2A JASPAR yes 112072631
chr19 2545786 2545798 MEF2B JASPAR yes 112072632
chr19 2545786 2545798 MEF2D JASPAR yes 112072633
chr19 2545819 2545824 SP1 TRANSFAC yes 70783850
chr19 2545819 2545824 SP1 TRANSFAC yes 112072634
chr19 2545819 2545828 HIC2 JASPAR yes 70783851
chr19 2545819 2545828 HIC2 JASPAR yes 112072635
chr19 2545822 2545826 LFA1 TRANSFAC yes 70783852
chr19 2545822 2545826 LFA1 TRANSFAC yes 112072636
chr19 2545823 2545833 ID4 JASPAR yes 70783853
chr19 2545823 2545833 TCF3 JASPAR yes 70783854
chr19 2545823 2545833 TCF4 JASPAR yes 70783855
chr19 2545823 2545833 ID4 JASPAR yes 112072637
chr19 2545823 2545833 TCF3 JASPAR yes 112072638
chr19 2545823 2545833 TCF4 JASPAR yes 112072639
chr19 2545824 2545833 SNAI2 JASPAR yes 70783856
chr19 2545824 2545833 SNAI2 JASPAR yes 112072640
chr19 2545825 2545830 USF2 TRANSFAC yes 70783857
chr19 2545825 2545830 USF2 TRANSFAC yes 112072641
chr19 2545885 2545902 ESR1 JASPAR yes 70783858
chr19 2545885 2545902 ESR1 JASPAR yes 112072642
chr19 2545889 2545898 RUNX2 JASPAR yes 70783859
chr19 2545889 2545898 RUNX2 JASPAR yes 112072643
chr19 2545900 2545918 E2F3 JASPAR yes 70783860
chr19 2545900 2545918 E2F3 JASPAR yes 112072644
chr19 2545901 2545917 E2F2 JASPAR yes 70783861
chr19 2545901 2545917 E2F2 JASPAR yes 112072645
chr19 2545925 2545944 PAX5 JASPAR yes 70783862
chr19 2545925 2545944 PAX5 JASPAR yes 112072646
chr19 2545927 2545931 LFA1 TRANSFAC yes 70783863
chr19 2545927 2545931 LFA1 TRANSFAC yes 112072647
chr19 2545928 2545945 PAX9 JASPAR yes 70783864
chr19 2545928 2545945 PAX9 JASPAR yes 112072648
chr19 2545950 2545964 IRF7 JASPAR yes 70783865
chr19 2545950 2545964 IRF7 JASPAR yes 112072649
chr19 2545951 2545966 STAT2 JASPAR yes 70783866
chr19 2545951 2545966 STAT2 JASPAR yes 112072650
chr19 2545952 2545964 IRF1 JASPAR yes 70783867
chr19 2545952 2545964 IRF1 JASPAR yes 112072651
chr19 2545952 2545967 FOXP1 JASPAR yes 70783868
chr19 2545952 2545967 FOXP1 JASPAR yes 112072652
chr19 2545952 2545973 IRF1 JASPAR yes 70783869
chr19 2545952 2545973 IRF1 JASPAR yes 112072653
chr19 2545954 2545974 RREB1 JASPAR yes 70783870
chr19 2545954 2545974 RREB1 JASPAR yes 112072654
chr19 2545957 2545969 IRF1 JASPAR yes 70783871
chr19 2545957 2545969 IRF1 JASPAR yes 112072655
chr19 2545957 2545972 FOXP1 JASPAR yes 70783872
chr19 2545957 2545972 FOXP1 JASPAR yes 112072656
chr19 2545957 2545978 IRF1 JASPAR yes 70783873
chr19 2545957 2545978 IRF1 JASPAR yes 112072657
chr19 2545959 2545979 RREB1 JASPAR yes 70783874
chr19 2545959 2545979 RREB1 JASPAR yes 112072658
chr19 2545962 2545974 IRF1 JASPAR yes 70783875
chr19 2545962 2545974 IRF1 JASPAR yes 112072659
chr19 2545962 2545977 FOXP1 JASPAR yes 70783876
chr19 2545962 2545977 FOXP1 JASPAR yes 112072660
chr19 2545962 2545983 IRF1 JASPAR yes 70783877
chr19 2545962 2545983 IRF1 JASPAR yes 112072661
chr19 2545964 2545984 RREB1 JASPAR yes 70783878
chr19 2545964 2545984 RREB1 JASPAR yes 112072662
chr19 2545967 2545979 IRF1 JASPAR yes 70783879
chr19 2545967 2545979 IRF1 JASPAR yes 112072663
chr19 2545967 2545982 FOXP1 JASPAR yes 70783880
chr19 2545967 2545982 FOXP1 JASPAR yes 112072664
chr19 2545969 2545989 RREB1 JASPAR yes 70783881
chr19 2545969 2545989 RREB1 JASPAR yes 112072665
chr19 2545971 2545986 FOXP1 JASPAR yes 70783882
chr19 2545971 2545986 FOXP1 JASPAR yes 112072666
chr19 2545972 2545983 FOXA1 JASPAR yes 70783883
chr19 2545972 2545983 FOXA1 JASPAR yes 112072667
chr19 2545972 2545987 FOXA1 JASPAR yes 70783884
chr19 2545972 2545987 FOXA1 JASPAR yes 112072668
chr19 2545973 2545985 FOXC2 JASPAR yes 70783885
chr19 2545973 2545985 FOXC2 JASPAR yes 112072669
chr19 2545974 2545986 FOXI1 JASPAR yes 70783886
chr19 2545974 2545986 FOXI1 JASPAR yes 112072670
chr19 2545981 2546002 IRF1 JASPAR yes 70783887
chr19 2545981 2546002 IRF1 JASPAR yes 112072671
chr19 2545982 2545997 FOXP1 JASPAR yes 70783888
chr19 2545982 2545997 FOXP1 JASPAR yes 112072672
chr19 2545983 2545998 IRF9 JASPAR yes 70783889
chr19 2545983 2545998 IRF9 JASPAR yes 112072673
chr19 2545984 2545998 IRF7 JASPAR yes 70783890
chr19 2545984 2545998 IRF8 JASPAR yes 70783891
chr19 2545984 2545998 IRF7 JASPAR yes 112072674
chr19 2545984 2545998 IRF8 JASPAR yes 112072675
chr19 2545985 2546000 PRDM1 JASPAR yes 70783892
chr19 2545985 2546000 PRDM1 JASPAR yes 112072676
chr19 2545985 2546003 IRF2 JASPAR yes 70783893
chr19 2545985 2546003 IRF2 JASPAR yes 112072677
chr19 2546024 2546028 LFA1 TRANSFAC yes 70783894
chr19 2546024 2546028 LFA1 TRANSFAC yes 112072678
chr19 2546030 2546045 NR2C2 JASPAR yes 70783895
chr19 2546030 2546045 NR2C2 JASPAR yes 112072679
SNP sites on vista28232[chr19:2545643-2546037]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2545902 rs145497104 A C
E2F2 E2F3 ESR1
5385530
chr19 2545953 rs113643770 A AAAAAC,AAAAACAAAAC
FOXP1 IRF1 IRF7 STAT2
5385531
chr19 2545953 rs71178287 A AAAAACAAAAC
FOXP1 IRF1 IRF7 STAT2
5385532
chr19 2545974 rs202078955 AAAAC A
FOXA1 FOXC2 FOXI1 FOXP1 IRF1 RREB1
5385533
chr19 2545989 rs545008598 AAAAG A
FOXP1 IRF1 IRF2 IRF7 IRF8 IRF9 PRDM1 RREB1
5385534
Genes possibly regulated by vista28232[chr19:2545643-2546037]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 11351
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 30477
Expression level of Genes
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miRNAs possibly regulated by vista28232[chr19:2545643-2546037]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results