EnhancerDB
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  3. rs202078955[chr19:2545974]
Enhancers that have rs202078955[chr19:2545974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 2545643 2546037 vista28232
VISTA
Transcript factors that have rs202078955[chr19:2545974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361965
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361966
chr19 2543303 2546222 ZNF274 GTRD no Blood (GM12878) 108361967
chr19 2545597 2547294 ZNF274 GTRD no Blood (GM12878) 108362367
chr19 2545613 2546689 ZNF274 GTRD no Blood (GM12878) 108362368
chr19 2545653 2547193 TCF7L2 GTRD no Colon (HCT116) 21837071
chr19 2545653 2547193 TCF7L2 GTRD no Colon (HCT116) 108362369
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 21837072
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 108362370
chr19 2545667 2546282 ZNF274 GTRD no Blood (GM12878) 108362371
chr19 2545667 2546285 ZNF274 GTRD no Blood (GM12878) 108362372
chr19 2545695 2546821 ZNF274 GTRD no Blood (GM12878) 108362373
chr19 2545707 2547566 ZNF274 GTRD no Liver (HepG2) 21837073
chr19 2545707 2547566 ZNF274 GTRD no Liver (HepG2) 108362374
chr19 2545710 2548076 ZNF274 GTRD no Liver (HepG2) 21837074
chr19 2545710 2548076 ZNF274 GTRD no Liver (HepG2) 108362375
chr19 2545720 2546278 ZNF274 GTRD no Blood (GM12878) 108362376
chr19 2545723 2547981 ZNF274 GTRD no Liver (HepG2) 21837075
chr19 2545723 2547981 ZNF274 GTRD no Liver (HepG2) 108362377
chr19 2545724 2546158 ZNF274 GTRD no Blood (GM12878) 108362378
chr19 2545741 2546111 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108362379
chr19 2545748 2547522 ZNF274 GTRD no Liver (HepG2) 21837076
chr19 2545748 2547522 ZNF274 GTRD no Liver (HepG2) 108362380
chr19 2545769 2548050 ZNF274 GTRD no Liver (HepG2) 21837077
chr19 2545769 2548050 ZNF274 GTRD no Liver (HepG2) 108362381
chr19 2545778 2546154 ZNF274 GTRD no Blood (GM12878) 108362382
chr19 2545780 2548156 ZNF274 GTRD no Liver (HepG2) 21837078
chr19 2545780 2548156 ZNF274 GTRD no Liver (HepG2) 108362383
chr19 2545783 2547026 TCF7L2 GTRD no Colon (HCT116) 21837079
chr19 2545783 2547026 TCF7L2 GTRD no Colon (HCT116) 108362384
chr19 2545790 2547257 ZNF274 GTRD no Blood (GM12878) 108362385
chr19 2545803 2547156 TCF7L2 GTRD no Colon (HCT116) 21837080
chr19 2545803 2547156 TCF7L2 GTRD no Colon (HCT116) 108362386
chr19 2545810 2547615 ZNF274 GTRD no Liver (HepG2) 21837081
chr19 2545810 2547615 ZNF274 GTRD no Liver (HepG2) 108362387
chr19 2545822 2546132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108362388
chr19 2545831 2547879 ZNF274 GTRD no Liver (HepG2) 21837082
chr19 2545831 2547879 ZNF274 GTRD no Liver (HepG2) 108362389
chr19 2545834 2547475 ZNF274 GTRD no Liver (HepG2) 21837083
chr19 2545834 2547475 ZNF274 GTRD no Liver (HepG2) 108362390
chr19 2545836 2546100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108362391
chr19 2545837 2548153 ZNF274 GTRD no Liver (HepG2) 21837084
chr19 2545837 2548153 ZNF274 GTRD no Liver (HepG2) 108362392
chr19 2545847 2548103 ZNF274 GTRD no Liver (HepG2) 21837085
chr19 2545847 2548103 ZNF274 GTRD no Liver (HepG2) 108362393
chr19 2545857 2547721 ZNF274 GTRD no Liver (HepG2) 21837086
chr19 2545857 2547721 ZNF274 GTRD no Liver (HepG2) 108362394
chr19 2545871 2547558 ZNF274 GTRD no Liver (HepG2) 21837087
chr19 2545871 2547558 ZNF274 GTRD no Liver (HepG2) 108362395
chr19 2545883 2547582 ZNF274 GTRD no Liver (HepG2) 21837088
chr19 2545883 2547582 ZNF274 GTRD no Liver (HepG2) 108362396
chr19 2545901 2547283 TCF7L2 GTRD no Colon (HCT116) 21837089
chr19 2545901 2547283 TCF7L2 GTRD no Colon (HCT116) 108362397
chr19 2545931 2546589 ZNF274 GTRD no Blood (GM12878) 108362398
chr19 2545935 2546947 TCF7L2 GTRD no Colon (HCT116) 21837090
chr19 2545935 2546947 TCF7L2 GTRD no Colon (HCT116) 108362399
chr19 2545954 2545974 RREB1 JASPAR yes 70783870
chr19 2545954 2545974 RREB1 JASPAR yes 112072654
chr19 2545957 2545978 IRF1 JASPAR yes 70783873
chr19 2545957 2545978 IRF1 JASPAR yes 112072657
chr19 2545959 2545979 RREB1 JASPAR yes 70783874
chr19 2545959 2545979 RREB1 JASPAR yes 112072658
chr19 2545962 2545974 IRF1 JASPAR yes 70783875
chr19 2545962 2545974 IRF1 JASPAR yes 112072659
chr19 2545962 2545977 FOXP1 JASPAR yes 70783876
chr19 2545962 2545977 FOXP1 JASPAR yes 112072660
chr19 2545962 2545983 IRF1 JASPAR yes 70783877
chr19 2545962 2545983 IRF1 JASPAR yes 112072661
chr19 2545964 2545984 RREB1 JASPAR yes 70783878
chr19 2545964 2545984 RREB1 JASPAR yes 112072662
chr19 2545967 2545979 IRF1 JASPAR yes 70783879
chr19 2545967 2545979 IRF1 JASPAR yes 112072663
chr19 2545967 2545982 FOXP1 JASPAR yes 70783880
chr19 2545967 2545982 FOXP1 JASPAR yes 112072664
chr19 2545969 2545989 RREB1 JASPAR yes 70783881
chr19 2545969 2545989 RREB1 JASPAR yes 112072665
chr19 2545971 2545986 FOXP1 JASPAR yes 70783882
chr19 2545971 2545986 FOXP1 JASPAR yes 112072666
chr19 2545972 2545983 FOXA1 JASPAR yes 70783883
chr19 2545972 2545983 FOXA1 JASPAR yes 112072667
chr19 2545972 2545987 FOXA1 JASPAR yes 70783884
chr19 2545972 2545987 FOXA1 JASPAR yes 112072668
chr19 2545973 2545985 FOXC2 JASPAR yes 70783885
chr19 2545973 2545985 FOXC2 JASPAR yes 112072669
chr19 2545974 2545986 FOXI1 JASPAR yes 70783886
chr19 2545974 2545986 FOXI1 JASPAR yes 112072670
Genes associated with rs202078955[chr19:2545974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More