EnhancerDB
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  3. vista28239[chr19:2616819-2617162]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28239[chr19:2616819-2617162]
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Tissue distribution of vista28239
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Transcription factor that possibly regulate vista28239[chr19:2616819-2617162]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2616823 2616838 TFAP2A JASPAR yes 70784215
chr19 2616823 2616838 TFAP2C JASPAR yes 70784216
chr19 2616823 2616838 TFAP2A JASPAR yes 112083691
chr19 2616823 2616838 TFAP2C JASPAR yes 112083692
chr19 2616824 2616838 PLAG1 JASPAR yes 70784217
chr19 2616824 2616838 PLAG1 JASPAR yes 112083693
chr19 2616826 2616838 TFAP2A JASPAR yes 70784218
chr19 2616826 2616838 TFAP2B JASPAR yes 70784219
chr19 2616826 2616838 TFAP2C JASPAR yes 70784220
chr19 2616826 2616838 TFAP2A JASPAR yes 112083694
chr19 2616826 2616838 TFAP2B JASPAR yes 112083695
chr19 2616826 2616838 TFAP2C JASPAR yes 112083696
chr19 2616827 2616836 TFAP2A JASPAR yes 70784221
chr19 2616827 2616836 TFAP2A JASPAR yes 112083697
chr19 2616836 2616843 PEA3 TRANSFAC yes 70784222
chr19 2616836 2616843 PEA3 TRANSFAC yes 112083698
chr19 2616841 2616849 FOXO3 JASPAR yes 70784223
chr19 2616841 2616849 FOXO3 JASPAR yes 112083699
chr19 2616852 2616862 NFIA JASPAR yes 70784224
chr19 2616852 2616862 NFIA JASPAR yes 112083700
chr19 2616854 2616860 NFIC JASPAR yes 70784225
chr19 2616854 2616860 NFIC JASPAR yes 112083701
chr19 2616867 2616872 SP1 TRANSFAC yes 70784226
chr19 2616867 2616872 SP1 TRANSFAC yes 112083702
chr19 2616879 2616888 THAP1 JASPAR yes 70784227
chr19 2616879 2616888 THAP1 JASPAR yes 112083703
chr19 2616887 2616897 GABPA JASPAR yes 70784228
chr19 2616887 2616897 GABPA JASPAR yes 112083704
chr19 2616890 2616897 SPIB JASPAR yes 70784229
chr19 2616890 2616897 SPIB JASPAR yes 112083705
chr19 2616901 2616914 JUN JASPAR yes 70784230
chr19 2616901 2616914 JUN JASPAR yes 112083706
chr19 2616911 2616924 NR2F1 JASPAR yes 70784231
chr19 2616911 2616924 NR2F1 JASPAR yes 112083707
chr19 2616915 2616919 ESR1 TRANSFAC yes 70784232
chr19 2616915 2616919 ESR1 TRANSFAC yes 112083708
chr19 2616916 2616926 BHLHE41 JASPAR yes 70784233
chr19 2616916 2616926 TFE3 JASPAR yes 70784234
chr19 2616916 2616926 TFEB JASPAR yes 70784235
chr19 2616916 2616926 BHLHE41 JASPAR yes 112083709
chr19 2616916 2616926 TFE3 JASPAR yes 112083710
chr19 2616916 2616926 TFEB JASPAR yes 112083711
chr19 2616922 2616927 GATA2 JASPAR yes 70784236
chr19 2616922 2616927 GATA2 JASPAR yes 112083712
chr19 2616933 2616942 SP1 TRANSFAC yes 70784237
chr19 2616933 2616942 SP1 TRANSFAC yes 112083713
chr19 2616933 2616952 PAX5 JASPAR yes 70784238
chr19 2616933 2616952 PAX5 JASPAR yes 112083714
chr19 2616934 2616942 SP1 TRANSFAC yes 70784239
chr19 2616934 2616942 SP1 TRANSFAC yes 112083715
chr19 2616934 2616944 SP1 JASPAR yes 70784240
chr19 2616934 2616944 SP1 JASPAR yes 112083716
chr19 2616946 2616950 ESR1 TRANSFAC yes 70784241
chr19 2616946 2616950 ESR1 TRANSFAC yes 112083717
chr19 2616961 2616976 PRDM1 JASPAR yes 70784242
chr19 2616961 2616976 PRDM1 JASPAR yes 112083718
chr19 2616966 2616972 TCF4 TRANSFAC yes 70784243
chr19 2616966 2616972 TCF4 TRANSFAC yes 112083719
chr19 2616985 2617000 HSF1 JASPAR yes 70784244
chr19 2616985 2617000 HSF1 JASPAR yes 112083720
chr19 2616986 2616999 HSF1 JASPAR yes 70784245
chr19 2616986 2616999 HSF2 JASPAR yes 70784246
chr19 2616986 2616999 HSF4 JASPAR yes 70784247
chr19 2616986 2616999 HSF1 JASPAR yes 112083721
chr19 2616986 2616999 HSF2 JASPAR yes 112083722
chr19 2616986 2616999 HSF4 JASPAR yes 112083723
chr19 2616998 2617004 TCF4 TRANSFAC yes 70784248
chr19 2616998 2617004 TCF4 TRANSFAC yes 112083724
chr19 2617036 2617048 HES7 JASPAR yes 70784249
chr19 2617036 2617048 HES7 JASPAR yes 112083725
chr19 2617037 2617047 BHLHE40 JASPAR yes 70784250
chr19 2617037 2617047 BHLHE41 JASPAR yes 70784251
chr19 2617037 2617047 HEY1 JASPAR yes 70784252
chr19 2617037 2617047 HEY2 JASPAR yes 70784253
chr19 2617037 2617047 MAX JASPAR yes 70784254
chr19 2617037 2617047 MLXIPL JASPAR yes 70784255
chr19 2617037 2617047 MLX JASPAR yes 70784256
chr19 2617037 2617047 MNT JASPAR yes 70784257
chr19 2617037 2617047 SREBF2 JASPAR yes 70784258
chr19 2617037 2617047 TFE3 JASPAR yes 70784259
chr19 2617037 2617047 TFEB JASPAR yes 70784260
chr19 2617037 2617047 TFEC JASPAR yes 70784261
chr19 2617037 2617047 BHLHE40 JASPAR yes 112083726
chr19 2617037 2617047 BHLHE41 JASPAR yes 112083727
chr19 2617037 2617047 HEY1 JASPAR yes 112083728
chr19 2617037 2617047 HEY2 JASPAR yes 112083729
chr19 2617037 2617047 MAX JASPAR yes 112083730
chr19 2617037 2617047 MLXIPL JASPAR yes 112083731
chr19 2617037 2617047 MLX JASPAR yes 112083732
chr19 2617037 2617047 MNT JASPAR yes 112083733
chr19 2617037 2617047 SREBF2 JASPAR yes 112083734
chr19 2617037 2617047 TFE3 JASPAR yes 112083735
chr19 2617037 2617047 TFEB JASPAR yes 112083736
chr19 2617037 2617047 TFEC JASPAR yes 112083737
chr19 2617037 2617048 USF1 JASPAR yes 70784262
chr19 2617037 2617048 USF2 JASPAR yes 70784263
chr19 2617037 2617048 USF1 JASPAR yes 112083738
chr19 2617037 2617048 USF2 JASPAR yes 112083739
chr19 2617038 2617048 MAX JASPAR yes 70784264
chr19 2617038 2617048 MAX JASPAR yes 112083740
chr19 2617039 2617044 MYC TRANSFAC yes 70784265
chr19 2617039 2617044 USF1 TRANSFAC yes 70784266
chr19 2617039 2617044 USF2 TRANSFAC yes 70784267
chr19 2617039 2617044 MYC TRANSFAC yes 112083741
chr19 2617039 2617044 USF1 TRANSFAC yes 112083742
chr19 2617039 2617044 USF2 TRANSFAC yes 112083743
chr19 2617046 2617050 NFE TRANSFAC yes 70784268
chr19 2617046 2617050 NFE TRANSFAC yes 112083744
chr19 2617048 2617058 NFATC3 JASPAR yes 70784269
chr19 2617048 2617058 NFATC3 JASPAR yes 112083745
chr19 2617050 2617056 ETS1 JASPAR yes 70784270
chr19 2617050 2617056 ETS1 JASPAR yes 112083746
chr19 2617066 2617070 YY1 TRANSFAC yes 70784271
chr19 2617066 2617070 YY1 TRANSFAC yes 112083747
chr19 2617073 2617083 POU6F2 JASPAR yes 70784272
chr19 2617073 2617083 POU6F2 JASPAR yes 112083748
chr19 2617074 2617084 ALX3 JASPAR yes 70784273
chr19 2617074 2617084 EMX1 JASPAR yes 70784274
chr19 2617074 2617084 EMX2 JASPAR yes 70784275
chr19 2617074 2617084 EVX2 JASPAR yes 70784276
chr19 2617074 2617084 GSX1 JASPAR yes 70784277
chr19 2617074 2617084 GSX2 JASPAR yes 70784278
chr19 2617074 2617084 HOXA2 JASPAR yes 70784279
chr19 2617074 2617084 HOXB2 JASPAR yes 70784280
chr19 2617074 2617084 HOXB3 JASPAR yes 70784281
chr19 2617074 2617084 MEOX1 JASPAR yes 70784282
chr19 2617074 2617084 MEOX2 JASPAR yes 70784283
chr19 2617074 2617084 NOTO JASPAR yes 70784284
chr19 2617074 2617084 ALX3 JASPAR yes 112083749
chr19 2617074 2617084 EMX1 JASPAR yes 112083750
chr19 2617074 2617084 EMX2 JASPAR yes 112083751
chr19 2617074 2617084 EVX2 JASPAR yes 112083752
chr19 2617074 2617084 GSX1 JASPAR yes 112083753
chr19 2617074 2617084 GSX2 JASPAR yes 112083754
chr19 2617074 2617084 HOXA2 JASPAR yes 112083755
chr19 2617074 2617084 HOXB2 JASPAR yes 112083756
chr19 2617074 2617084 HOXB3 JASPAR yes 112083757
chr19 2617074 2617084 MEOX1 JASPAR yes 112083758
chr19 2617074 2617084 MEOX2 JASPAR yes 112083759
chr19 2617074 2617084 NOTO JASPAR yes 112083760
chr19 2617075 2617083 DLX6 JASPAR yes 70784285
chr19 2617075 2617083 EN1 JASPAR yes 70784286
chr19 2617075 2617083 LBX1 JASPAR yes 70784287
chr19 2617075 2617083 PAX4 JASPAR yes 70784288
chr19 2617075 2617083 PDX1 JASPAR yes 70784289
chr19 2617075 2617083 VAX1 JASPAR yes 70784290
chr19 2617075 2617083 VAX2 JASPAR yes 70784291
chr19 2617075 2617083 VSX1 JASPAR yes 70784292
chr19 2617075 2617083 VSX2 JASPAR yes 70784293
chr19 2617075 2617083 DLX6 JASPAR yes 112083761
chr19 2617075 2617083 EN1 JASPAR yes 112083762
chr19 2617075 2617083 LBX1 JASPAR yes 112083763
chr19 2617075 2617083 PAX4 JASPAR yes 112083764
chr19 2617075 2617083 PDX1 JASPAR yes 112083765
chr19 2617075 2617083 VAX1 JASPAR yes 112083766
chr19 2617075 2617083 VAX2 JASPAR yes 112083767
chr19 2617075 2617083 VSX1 JASPAR yes 112083768
chr19 2617075 2617083 VSX2 JASPAR yes 112083769
chr19 2617076 2617087 PHOX2A JASPAR yes 70784294
chr19 2617076 2617087 PHOX2A JASPAR yes 112083770
chr19 2617080 2617090 TEAD1 JASPAR yes 70784295
chr19 2617080 2617090 TEAD4 JASPAR yes 70784296
chr19 2617080 2617090 TEAD1 JASPAR yes 112083771
chr19 2617080 2617090 TEAD4 JASPAR yes 112083772
chr19 2617081 2617089 TEAD3 JASPAR yes 70784297
chr19 2617081 2617089 TEAD3 JASPAR yes 112083773
chr19 2617085 2617097 MYBL1 JASPAR yes 70784298
chr19 2617085 2617097 MYBL1 JASPAR yes 112083774
chr19 2617090 2617093 MYB TRANSFAC yes 70784299
chr19 2617090 2617093 MYB TRANSFAC yes 112083775
chr19 2617104 2617109 ATF1 TRANSFAC yes 70784300
chr19 2617104 2617109 ATF1 TRANSFAC yes 112083776
chr19 2617128 2617142 TLX1 JASPAR yes 70784301
chr19 2617128 2617142 TLX1 JASPAR yes 112083777
chr19 2617135 2617140 SP1 TRANSFAC yes 70784302
chr19 2617135 2617140 SP1 TRANSFAC yes 112083778
chr19 2617135 2617147 YY1 JASPAR yes 70784303
chr19 2617135 2617147 YY1 JASPAR yes 112083779
chr19 2617138 2617144 YY1 JASPAR yes 70784304
chr19 2617138 2617144 YY1 JASPAR yes 112083780
chr19 2617146 2617167 REST JASPAR yes 70784305
chr19 2617146 2617167 REST JASPAR yes 112083781
chr19 2617147 2617166 REST JASPAR yes 70784306
chr19 2617147 2617166 REST JASPAR yes 112083782
chr19 2617149 2617164 ZIC3 JASPAR yes 70784307
chr19 2617149 2617164 ZIC4 JASPAR yes 70784308
chr19 2617149 2617164 ZIC3 JASPAR yes 112083783
chr19 2617149 2617164 ZIC4 JASPAR yes 112083784
chr19 2617150 2617164 ZIC1 JASPAR yes 70784309
chr19 2617150 2617164 ZIC1 JASPAR yes 112083785
SNP sites on vista28239[chr19:2616819-2617162]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2616970 rs74862533 A G
PRDM1 TCF4
5387059
chr19 2617042 rs117665901 C T
BHLHE40 BHLHE41 HES7 HEY1 HEY2 MAX MLX MLXIPL MNT MYC SREBF2 TFE3 TFEB TFEC USF1 USF2
5387060
chr19 2617052 rs62123731 G A
ETS1 NFATC3
5387061
chr19 2617151 rs545821425 C T
REST ZIC1 ZIC3 ZIC4
5387062
Genes possibly regulated by vista28239[chr19:2616819-2617162]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 14455
Expression level of Genes
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miRNAs possibly regulated by vista28239[chr19:2616819-2617162]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results