EnhancerDB
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  3. rs74862533[chr19:2616970]
Enhancers that have rs74862533[chr19:2616970]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr19 2616819 2617162 vista28239
VISTA
Transcript factors that have rs74862533[chr19:2616970]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 21837652
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 108363219
chr19 2616591 2617289 ZNF274 GTRD no Liver (HepG2) 21837653
chr19 2616591 2617289 ZNF274 GTRD no Liver (HepG2) 108363220
chr19 2616603 2617036 ZNF274 GTRD no Liver (HepG2) 21837654
chr19 2616603 2617036 ZNF274 GTRD no Liver (HepG2) 108363221
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 21837655
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 108363222
chr19 2616625 2617516 ZNF274 GTRD no Blood (GM12878) 21837656
chr19 2616625 2617516 ZNF274 GTRD no Blood (GM12878) 108363223
chr19 2616734 2617210 ZNF274 GTRD no Blood (GM12878) 21837657
chr19 2616734 2617210 ZNF274 GTRD no Blood (GM12878) 108363224
chr19 2616734 2617328 ZNF274 GTRD no Bone Marrow (K562) 21837658
chr19 2616734 2617328 ZNF274 GTRD no Bone Marrow (K562) 108363225
chr19 2616739 2617055 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21837659
chr19 2616739 2617055 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108363226
chr19 2616743 2617200 ZNF274 GTRD no Liver (HepG2) 21837660
chr19 2616743 2617200 ZNF274 GTRD no Liver (HepG2) 108363227
chr19 2616759 2617600 ZNF274 GTRD no Blood (GM12878) 21837661
chr19 2616759 2617600 ZNF274 GTRD no Blood (GM12878) 108363228
chr19 2616764 2617022 ZNF274 GTRD no Liver (HepG2) 21837662
chr19 2616764 2617022 ZNF274 GTRD no Liver (HepG2) 108363229
chr19 2616768 2617190 ZNF274 GTRD no Liver (HepG2) 21837663
chr19 2616768 2617190 ZNF274 GTRD no Liver (HepG2) 108363230
chr19 2616784 2617334 ZNF274 GTRD no Blood (GM12878) 21837664
chr19 2616784 2617334 ZNF274 GTRD no Blood (GM12878) 108363231
chr19 2616789 2617119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21837665
chr19 2616789 2617119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108363232
chr19 2616806 2617010 ZNF274 GTRD no Liver (HepG2) 21837666
chr19 2616806 2617010 ZNF274 GTRD no Liver (HepG2) 108363233
chr19 2616812 2616993 ZNF274 GTRD no Liver (HepG2) 21837667
chr19 2616812 2616993 ZNF274 GTRD no Liver (HepG2) 108363234
chr19 2616824 2617126 ZNF274 GTRD no Liver (HepG2) 21837668
chr19 2616824 2617126 ZNF274 GTRD no Liver (HepG2) 108363235
chr19 2616845 2617300 ZNF274 GTRD no Bone Marrow (K562) 21837669
chr19 2616845 2617300 ZNF274 GTRD no Bone Marrow (K562) 108363236
chr19 2616880 2617150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21837670
chr19 2616880 2617150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108363237
chr19 2616907 2617140 ZNF274 GTRD no Bone Marrow (K562) 21837671
chr19 2616907 2617140 ZNF274 GTRD no Bone Marrow (K562) 108363238
chr19 2616913 2617223 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21837672
chr19 2616913 2617223 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108363239
chr19 2616921 2617121 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21837673
chr19 2616921 2617121 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108363240
chr19 2616961 2616976 PRDM1 JASPAR yes 70784242
chr19 2616961 2616976 PRDM1 JASPAR yes 112083718
chr19 2616966 2616972 TCF4 TRANSFAC yes 70784243
chr19 2616966 2616972 TCF4 TRANSFAC yes 112083719
Genes associated with rs74862533[chr19:2616970], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 1905213 1926016 + SCAMP4 ENSG00000227500.5 1905213 690954 Liver 0.132766 16765