EnhancerDB
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  3. vista28269[chr19:3140705-3140960]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28269[chr19:3140705-3140960]
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Tissue distribution of vista28269
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Transcription factor that possibly regulate vista28269[chr19:3140705-3140960]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3140731 3140749 MAFF JASPAR yes 70785665
chr19 3140731 3140749 MAFF JASPAR yes 112114155
chr19 3140732 3140738 HiNF-A TRANSFAC yes 70785666
chr19 3140732 3140738 HiNF-A TRANSFAC yes 112114156
chr19 3140733 3140748 MAFK JASPAR yes 70785667
chr19 3140733 3140748 MAFK JASPAR yes 112114157
chr19 3140758 3140772 JUN JASPAR yes 70785668
chr19 3140758 3140772 JUN JASPAR yes 112114158
chr19 3140759 3140772 DUXA JASPAR yes 70785669
chr19 3140759 3140772 DUXA JASPAR yes 112114159
chr19 3140759 3140773 POU4F1 JASPAR yes 70785670
chr19 3140759 3140773 POU4F1 JASPAR yes 112114160
chr19 3140760 3140771 BATF JASPAR yes 70785671
chr19 3140760 3140771 DUX4 JASPAR yes 70785672
chr19 3140760 3140771 BATF JASPAR yes 112114161
chr19 3140760 3140771 DUX4 JASPAR yes 112114162
chr19 3140762 3140773 FOS JASPAR yes 70785673
chr19 3140762 3140773 JUND JASPAR yes 70785674
chr19 3140762 3140773 NFE2 JASPAR yes 70785675
chr19 3140762 3140773 FOS JASPAR yes 112114163
chr19 3140762 3140773 JUND JASPAR yes 112114164
chr19 3140762 3140773 NFE2 JASPAR yes 112114165
chr19 3140763 3140771 JUND TRANSFAC yes 70785676
chr19 3140763 3140771 JUND TRANSFAC yes 112114166
chr19 3140763 3140772 JDP2 JASPAR yes 70785677
chr19 3140763 3140772 JDP2 JASPAR yes 112114167
chr19 3140763 3140774 FOSL2 JASPAR yes 70785678
chr19 3140763 3140774 JUNB JASPAR yes 70785679
chr19 3140763 3140774 FOSL2 JASPAR yes 112114168
chr19 3140763 3140774 JUNB JASPAR yes 112114169
chr19 3140763 3140777 JUN JASPAR yes 70785680
chr19 3140763 3140777 JUN JASPAR yes 112114170
chr19 3140764 3140770 JUN TRANSFAC yes 70785681
chr19 3140764 3140770 JUN TRANSFAC yes 112114171
chr19 3140769 3140773 YY1 TRANSFAC yes 70785682
chr19 3140769 3140773 YY1 TRANSFAC yes 112114172
chr19 3140773 3140785 E2F8 JASPAR yes 70785683
chr19 3140773 3140785 E2F8 JASPAR yes 112114173
chr19 3140774 3140794 PPARG JASPAR yes 70785684
chr19 3140774 3140794 PPARG JASPAR yes 112114174
chr19 3140775 3140780 TFAP2A TRANSFAC yes 70785685
chr19 3140775 3140780 TFAP2A TRANSFAC yes 112114175
chr19 3140775 3140781 MZF1 JASPAR yes 70785686
chr19 3140775 3140781 MZF1 JASPAR yes 112114176
chr19 3140785 3140797 INSM1 JASPAR yes 70785687
chr19 3140785 3140797 INSM1 JASPAR yes 112114177
chr19 3140796 3140807 DMRT3 JASPAR yes 70785688
chr19 3140796 3140807 DMRT3 JASPAR yes 112114178
chr19 3140819 3140832 NFKB2 JASPAR yes 70785689
chr19 3140819 3140832 NFKB2 JASPAR yes 112114179
chr19 3140820 3140830 NFKB1 JASPAR yes 70785690
chr19 3140820 3140830 NFKB1 JASPAR yes 112114180
chr19 3140820 3140831 NFKB1 JASPAR yes 70785691
chr19 3140820 3140831 NFKB1 JASPAR yes 112114181
chr19 3140821 3140831 NFKB1 JASPAR yes 70785692
chr19 3140821 3140831 RELA JASPAR yes 70785693
chr19 3140821 3140831 REL JASPAR yes 70785694
chr19 3140821 3140831 NFKB1 JASPAR yes 112114182
chr19 3140821 3140831 RELA JASPAR yes 112114183
chr19 3140821 3140831 REL JASPAR yes 112114184
chr19 3140834 3140844 TEAD1 JASPAR yes 70785695
chr19 3140834 3140844 TEAD4 JASPAR yes 70785696
chr19 3140834 3140844 TEAD1 JASPAR yes 112114185
chr19 3140834 3140844 TEAD4 JASPAR yes 112114186
chr19 3140847 3140851 LFA1 TRANSFAC yes 70785697
chr19 3140847 3140851 LFA1 TRANSFAC yes 112114187
chr19 3140868 3140881 ELF1 JASPAR yes 70785698
chr19 3140868 3140881 ELF1 JASPAR yes 112114188
chr19 3140871 3140882 ELK4 JASPAR yes 70785699
chr19 3140871 3140882 FLI1 JASPAR yes 70785700
chr19 3140871 3140882 ELK4 JASPAR yes 112114189
chr19 3140871 3140882 FLI1 JASPAR yes 112114190
chr19 3140873 3140883 NFKB1 JASPAR yes 70785701
chr19 3140873 3140883 NFKB1 JASPAR yes 112114191
chr19 3140896 3140900 LFA1 TRANSFAC yes 70785702
chr19 3140896 3140900 LFA1 TRANSFAC yes 112114192
chr19 3140913 3140928 TFAP2C JASPAR yes 70785703
chr19 3140913 3140928 TFAP2C JASPAR yes 112114193
chr19 3140915 3140930 TFAP2A JASPAR yes 70785704
chr19 3140915 3140930 TFAP2A JASPAR yes 112114194
chr19 3140917 3140923 MZF1 JASPAR yes 70785705
chr19 3140917 3140923 MZF1 JASPAR yes 112114195
chr19 3140931 3140952 REST JASPAR yes 70785706
chr19 3140931 3140952 REST JASPAR yes 112114196
chr19 3140938 3140950 TEAD1 JASPAR yes 70785707
chr19 3140938 3140950 TEAD1 JASPAR yes 112114197
chr19 3140938 3140954 ZNF143 JASPAR yes 70785708
chr19 3140938 3140954 ZNF143 JASPAR yes 112114198
chr19 3140939 3140950 FOXH1 JASPAR yes 70785709
chr19 3140939 3140950 FOXH1 JASPAR yes 112114199
chr19 3140940 3140955 RUNX2 JASPAR yes 70785710
chr19 3140940 3140955 RUNX2 JASPAR yes 112114200
chr19 3140943 3140954 RUNX1 JASPAR yes 70785711
chr19 3140943 3140954 RUNX1 JASPAR yes 112114201
chr19 3140944 3140954 RUNX3 JASPAR yes 70785712
chr19 3140944 3140954 RUNX3 JASPAR yes 112114202
chr19 3140945 3140954 RUNX2 JASPAR yes 70785713
chr19 3140945 3140954 RUNX2 JASPAR yes 112114203
SNP sites on vista28269[chr19:3140705-3140960]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3140732 rs186060679 A G
HiNF-A MAFF
5391833
chr19 3140740 rs113585476 CTGAA C
MAFF MAFK
5391834
chr19 3140740 rs538059354 C CTGAA
MAFF MAFK
5391835
chr19 3140740 rs71179973 CTGAA C
MAFF MAFK
5391836
chr19 3140786 rs12975183 T C
INSM1 PPARG
5391837
chr19 3140909 rs389238 A T no 5391838
chr19 3140940 rs552797681 T C
FOXH1 REST RUNX2 TEAD1 ZNF143
5391839
Genes possibly regulated by vista28269[chr19:3140705-3140960]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2997636 3047633 - TLE2 ENSG00000065717.10 3047633 0.79 1.0 16798 6928
chr19 3052908 3063105 - AES ENSG00000104964.10 3063105 0.68 1.0 16799 22400
chr19 3094408 3124002 + GNA11 ENSG00000088256.4 3094408 0.65 1.0 16800 53703
chr19 3136191 3163767 + GNA15 ENSG00000060558.3 3136191 0.88 1.0 16801 95486
chr19 3172344 3180329 + S1PR4 ENSG00000125910.4 3172344 0.92 0.97 16802 68616
chr19 3185561 3209573 + NCLN ENSG00000125912.6 3185561 0.65 1.0 16803 55399
chr19 3224701 3297074 + CELF5 ENSG00000161082.8 3224701 0.97 1.0 16804 16259
Expression level of Genes
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miRNAs possibly regulated by vista28269[chr19:3140705-3140960]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results