EnhancerDB
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  3. rs552797681[chr19:3140940]
Enhancers that have rs552797681[chr19:3140940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3138785 3144645 enh17859
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas (Panc1) Uterus Thymus Heart
chr19 3140705 3140960 vista28269
VISTA
Transcript factors that have rs552797681[chr19:3140940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3140424 3141194 ZNF274 GTRD no Blood (GM12878) 21838650
chr19 3140424 3141194 ZNF274 GTRD no Blood (GM12878) 108365265
chr19 3140436 3141194 ZNF274 GTRD no Blood (GM12878) 21838651
chr19 3140436 3141194 ZNF274 GTRD no Blood (GM12878) 108365266
chr19 3140491 3141268 ZNF274 GTRD no Blood (GM12878) 21838652
chr19 3140491 3141268 ZNF274 GTRD no Blood (GM12878) 108365267
chr19 3140565 3141224 ZNF274 GTRD no Blood (GM12878) 21838653
chr19 3140565 3141224 ZNF274 GTRD no Blood (GM12878) 108365268
chr19 3140567 3141208 ZNF274 GTRD no Blood (GM12878) 21838654
chr19 3140567 3141208 ZNF274 GTRD no Blood (GM12878) 108365269
chr19 3140573 3141316 ZNF274 GTRD no Blood (GM12878) 21838655
chr19 3140573 3141316 ZNF274 GTRD no Blood (GM12878) 108365270
chr19 3140590 3141204 ZNF274 GTRD no Blood (GM12878) 21838656
chr19 3140590 3141204 ZNF274 GTRD no Blood (GM12878) 108365271
chr19 3140606 3141079 ZNF274 GTRD no Bone Marrow (K562) 108365272
chr19 3140615 3140999 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21838657
chr19 3140615 3140999 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108365273
chr19 3140617 3141044 ZNF274 GTRD no Blood (GM12878) 21838658
chr19 3140617 3141044 ZNF274 GTRD no Blood (GM12878) 108365274
chr19 3140639 3141099 ZNF274 GTRD no Blood (GM12878) 21838659
chr19 3140639 3141099 ZNF274 GTRD no Blood (GM12878) 108365275
chr19 3140673 3140997 ZNF274 GTRD no Blood (GM12878) 21838660
chr19 3140673 3140997 ZNF274 GTRD no Blood (GM12878) 108365276
chr19 3140682 3141050 ZNF274 GTRD no Blood (GM12878) 21838661
chr19 3140682 3141050 ZNF274 GTRD no Blood (GM12878) 108365277
chr19 3140752 3141256 ZNF274 GTRD no Blood (GM12878) 21838662
chr19 3140752 3141256 ZNF274 GTRD no Blood (GM12878) 108365278
chr19 3140756 3141126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21838663
chr19 3140756 3141126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108365279
chr19 3140867 3141036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21838664
chr19 3140867 3141036 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108365280
chr19 3140873 3141149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21838665
chr19 3140873 3141149 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108365281
chr19 3140931 3140952 REST JASPAR yes 70785706
chr19 3140931 3140952 REST JASPAR yes 112114196
chr19 3140938 3140950 TEAD1 JASPAR yes 70785707
chr19 3140938 3140950 TEAD1 JASPAR yes 112114197
chr19 3140938 3140954 ZNF143 JASPAR yes 70785708
chr19 3140938 3140954 ZNF143 JASPAR yes 112114198
chr19 3140939 3140950 FOXH1 JASPAR yes 70785709
chr19 3140939 3140950 FOXH1 JASPAR yes 112114199
chr19 3140940 3140955 RUNX2 JASPAR yes 70785710
chr19 3140940 3140955 RUNX2 JASPAR yes 112114200
Genes associated with rs552797681[chr19:3140940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More