EnhancerDB
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  3. vista28290[chr19:3405079-3405252]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28290[chr19:3405079-3405252]
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Tissue distribution of vista28290
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Transcription factor that possibly regulate vista28290[chr19:3405079-3405252]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3405067 3405088 ZNF263 JASPAR yes 70787159
chr19 3405067 3405088 ZNF263 JASPAR yes 112128924
chr19 3405068 3405089 ZNF263 JASPAR yes 70787160
chr19 3405068 3405089 ZNF263 JASPAR yes 112128927
chr19 3405069 3405083 MTF1 JASPAR yes 70787161
chr19 3405069 3405083 MTF1 JASPAR yes 112128928
chr19 3405078 3405093 FOXP1 JASPAR yes 70787162
chr19 3405078 3405093 FOXP1 JASPAR yes 112128929
chr19 3405079 3405100 IRF1 JASPAR yes 70787163
chr19 3405079 3405100 IRF1 JASPAR yes 112128930
chr19 3405081 3405096 IRF9 JASPAR yes 70787164
chr19 3405081 3405096 IRF9 JASPAR yes 112128931
chr19 3405083 3405097 STAT1 JASPAR yes 70787165
chr19 3405083 3405097 STAT1 JASPAR yes 112128932
chr19 3405083 3405098 STAT2 JASPAR yes 70787166
chr19 3405083 3405098 STAT2 JASPAR yes 112128933
chr19 3405083 3405101 IRF2 JASPAR yes 70787167
chr19 3405083 3405101 IRF2 JASPAR yes 112128934
chr19 3405085 3405103 NR3C1 JASPAR yes 70787168
chr19 3405085 3405103 NR3C1 JASPAR yes 112128935
chr19 3405116 3405136 TP63 JASPAR yes 70787169
chr19 3405116 3405136 TP63 JASPAR yes 112128936
chr19 3405123 3405137 TLX1 JASPAR yes 70787170
chr19 3405123 3405137 TLX1 JASPAR yes 112128937
chr19 3405136 3405141 SP1 TRANSFAC yes 70787171
chr19 3405136 3405141 SP1 TRANSFAC yes 112128938
chr19 3405151 3405172 ZNF263 JASPAR yes 70787172
chr19 3405151 3405172 ZNF263 JASPAR yes 112128939
chr19 3405153 3405174 ZNF263 JASPAR yes 70787173
chr19 3405153 3405174 ZNF263 JASPAR yes 112128940
chr19 3405160 3405175 PRDM1 JASPAR yes 70787174
chr19 3405160 3405175 PRDM1 JASPAR yes 112128941
chr19 3405163 3405173 NFATC3 JASPAR yes 70787175
chr19 3405163 3405173 NFATC3 JASPAR yes 112128942
chr19 3405186 3405191 ETS2 TRANSFAC yes 70787176
chr19 3405186 3405191 ETS2 TRANSFAC yes 112128943
chr19 3405193 3405204 FLI1 JASPAR yes 70787177
chr19 3405193 3405204 FLI1 JASPAR yes 112128944
chr19 3405194 3405202 EHF JASPAR yes 70787178
chr19 3405194 3405202 EHF JASPAR yes 112128945
chr19 3405197 3405218 ZNF263 JASPAR yes 70787179
chr19 3405197 3405218 ZNF263 JASPAR yes 112128946
chr19 3405210 3405221 NFKB1 JASPAR yes 70787180
chr19 3405210 3405221 NFKB1 JASPAR yes 112128947
chr19 3405241 3405249 NR4A2 JASPAR yes 70787181
chr19 3405241 3405249 NR4A2 JASPAR yes 112128948
chr19 3405242 3405257 ESR2 JASPAR yes 70787182
chr19 3405242 3405257 ESR2 JASPAR yes 112128949
chr19 3405243 3405247 ESR1 TRANSFAC yes 70787183
chr19 3405243 3405247 ESR1 TRANSFAC yes 112128950
chr19 3405248 3405258 SP1 JASPAR yes 70787184
chr19 3405248 3405258 SP1 JASPAR yes 112128951
SNP sites on vista28290[chr19:3405079-3405252]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3405223 rs565404552 G C no 5394141
Genes possibly regulated by vista28290[chr19:3405079-3405252]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 54482
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 24712
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 4314
Expression level of Genes
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miRNAs possibly regulated by vista28290[chr19:3405079-3405252]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results