EnhancerDB
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  3. rs565404552[chr19:3405223]
Enhancers that have rs565404552[chr19:3405223]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3395005 3410358 enh17863
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
chr19 3405079 3405252 vista28290
VISTA
Transcript factors that have rs565404552[chr19:3405223]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3402647 3405571 TCF7L2 GTRD no Colon (HCT116) 21839354
chr19 3402647 3405571 TCF7L2 GTRD no Colon (HCT116) 108366699
chr19 3402647 3405571 TCF7L2 GTRD no Colon (HCT116) 108366700
chr19 3402647 3405571 TCF7L2 GTRD no Colon (HCT116) 108366701
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 21839355
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 108366702
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 108366703
chr19 3403375 3405612 TCF7L2 GTRD no Colon (HCT116) 108366704
chr19 3403464 3405554 TCF7L2 GTRD no Colon (HCT116) 21839356
chr19 3403464 3405554 TCF7L2 GTRD no Colon (HCT116) 108366705
chr19 3403464 3405554 TCF7L2 GTRD no Colon (HCT116) 108366706
chr19 3403464 3405554 TCF7L2 GTRD no Colon (HCT116) 108366707
chr19 3403502 3405348 TCF7L2 GTRD no Colon (HCT116) 21839357
chr19 3403502 3405348 TCF7L2 GTRD no Colon (HCT116) 108366708
chr19 3403502 3405348 TCF7L2 GTRD no Colon (HCT116) 108366709
chr19 3403502 3405348 TCF7L2 GTRD no Colon (HCT116) 108366710
chr19 3403570 3405416 TCF7L2 GTRD no Colon (HCT116) 21839358
chr19 3403570 3405416 TCF7L2 GTRD no Colon (HCT116) 108366711
chr19 3403570 3405416 TCF7L2 GTRD no Colon (HCT116) 108366712
chr19 3403570 3405416 TCF7L2 GTRD no Colon (HCT116) 108366713
chr19 3403829 3405338 ZNF274 GTRD no Bone Marrow (K562) 108366721
chr19 3403829 3405338 ZNF274 GTRD no Bone Marrow (K562) 108366722
chr19 3403829 3405338 ZNF274 GTRD no Bone Marrow (K562) 108366723
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 21839373
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 108366749
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 108366750
chr19 3404073 3405649 TCF7L2 GTRD no Colon (HCT116) 108366751
chr19 3404077 3405225 ZNF274 GTRD no Bone Marrow (K562) 108366754
chr19 3404077 3405225 ZNF274 GTRD no Bone Marrow (K562) 108366755
chr19 3404077 3405225 ZNF274 GTRD no Bone Marrow (K562) 108366756
chr19 3404319 3405310 P63 GTRD no Skin (Keratinocyte) 108366775
chr19 3404319 3405310 P63 GTRD no Skin (Keratinocyte) 108366776
chr19 3404319 3405310 P63 GTRD no Skin (Keratinocyte) 108366777
chr19 3404380 3405254 P63 GTRD no Skin (Keratinocyte) 108366790
chr19 3404380 3405254 P63 GTRD no Skin (Keratinocyte) 108366791
chr19 3404585 3405443 ZNF274 GTRD no Blood (GM12878) 108366807
chr19 3404585 3405443 ZNF274 GTRD no Blood (GM12878) 108366808
chr19 3404755 3405445 TCF7L2 GTRD no Colon (HCT116) 21839385
chr19 3404755 3405445 TCF7L2 GTRD no Colon (HCT116) 108366814
chr19 3404755 3405445 TCF7L2 GTRD no Colon (HCT116) 108366815
chr19 3405182 3405572 ZNF274 GTRD no Bone Marrow (K562) 108366816
Genes associated with rs565404552[chr19:3405223], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More