EnhancerDB
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  3. vista28296[chr19:3484915-3485311]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28296[chr19:3484915-3485311]
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Tissue distribution of vista28296
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Transcription factor that possibly regulate vista28296[chr19:3484915-3485311]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3485013 3485569 CTCF UCSC Txn Factor no Conserved 108367326
chr19 3485030 3485326 SMC3 UCSC Txn Factor no Conserved 108367331
chr19 3485053 3485336 RAD21 UCSC Txn Factor no Conserved 108367341
chr19 3484922 3484926 LFA1 TRANSFAC yes 70787444
chr19 3484927 3484939 INSM1 JASPAR yes 70787445
chr19 3484927 3484941 GLIS3 JASPAR yes 70787446
chr19 3484934 3484940 TCF4 TRANSFAC yes 70787447
chr19 3484937 3484952 TFAP2A JASPAR yes 70787448
chr19 3484940 3484952 TFAP2A JASPAR yes 70787449
chr19 3484940 3484952 TFAP2B JASPAR yes 70787450
chr19 3484940 3484952 TFAP2C JASPAR yes 70787451
chr19 3484940 3484955 TFAP2A JASPAR yes 70787452
chr19 3484940 3484955 TFAP2C JASPAR yes 70787453
chr19 3484941 3484950 TFAP2A JASPAR yes 70787454
chr19 3484942 3484951 TFAP2A JASPAR yes 70787455
chr19 3484947 3484951 LFA1 TRANSFAC yes 70787456
chr19 3484947 3484967 TP63 JASPAR yes 70787457
chr19 3484971 3484977 PEA3 TRANSFAC yes 70787458
chr19 3485000 3485020 ESR1 JASPAR yes 70787459
chr19 3485000 3485021 ZNF263 JASPAR yes 70787460
chr19 3485006 3485027 ZNF263 JASPAR yes 70787461
chr19 3485009 3485030 ZNF263 JASPAR yes 70787462
chr19 3485015 3485029 PLAG1 JASPAR yes 70787463
chr19 3485015 3485036 ZNF263 JASPAR yes 70787464
chr19 3485017 3485038 ZNF263 JASPAR yes 70787465
chr19 3485018 3485039 ZNF263 JASPAR yes 70787466
chr19 3485021 3485031 ZNF740 JASPAR yes 70787467
chr19 3485024 3485034 SP1 JASPAR yes 70787468
chr19 3485024 3485045 ZNF263 JASPAR yes 70787469
chr19 3485025 3485034 SP1 TRANSFAC yes 70787470
chr19 3485025 3485035 SP1 JASPAR yes 70787471
chr19 3485025 3485046 ZNF263 JASPAR yes 70787472
chr19 3485026 3485035 SP1 TRANSFAC yes 70787473
chr19 3485027 3485033 MAZ TRANSFAC yes 70787474
chr19 3485033 3485043 SP1 JASPAR yes 70787475
chr19 3485036 3485046 MZF1 JASPAR yes 70787476
chr19 3485039 3485044 TFAP2A TRANSFAC yes 70787477
chr19 3485039 3485045 MZF1 JASPAR yes 70787478
chr19 3485044 3485064 TP53 JASPAR yes 70787479
chr19 3485046 3485050 NFE TRANSFAC yes 70787480
chr19 3485049 3485058 THAP1 JASPAR yes 70787481
chr19 3485052 3485056 LFA1 TRANSFAC yes 70787482
chr19 3485057 3485061 H4TF2 TRANSFAC yes 70787483
chr19 3485065 3485083 ESR1 JASPAR yes 70787484
chr19 3485104 3485116 TEAD1 JASPAR yes 70787485
chr19 3485106 3485116 TEAD1 JASPAR yes 70787486
chr19 3485106 3485116 TEAD4 JASPAR yes 70787487
chr19 3485107 3485115 TEAD3 JASPAR yes 70787488
chr19 3485111 3485124 SMAD2 JASPAR yes 70787489
chr19 3485125 3485140 RUNX2 JASPAR yes 70787490
chr19 3485131 3485140 THAP1 JASPAR yes 70787491
chr19 3485134 3485138 LFA1 TRANSFAC yes 70787492
chr19 3485139 3485146 CEBPA TRANSFAC yes 70787493
chr19 3485150 3485154 H4TF2 TRANSFAC yes 70787494
chr19 3485150 3485171 REST JASPAR yes 70787495
chr19 3485158 3485168 ID4 JASPAR yes 70787496
chr19 3485158 3485168 TCF3 JASPAR yes 70787497
chr19 3485158 3485168 TCF4 JASPAR yes 70787498
chr19 3485168 3485177 SNAI2 JASPAR yes 70787499
chr19 3485168 3485178 ID4 JASPAR yes 70787500
chr19 3485168 3485178 TCF3 JASPAR yes 70787501
chr19 3485168 3485178 TCF4 JASPAR yes 70787502
chr19 3485171 3485190 CTCF JASPAR yes 70787503
chr19 3485191 3485203 E2F8 JASPAR yes 70787504
chr19 3485193 3485198 TFAP2A TRANSFAC yes 70787505
chr19 3485193 3485199 MZF1 JASPAR yes 70787506
chr19 3485210 3485224 PLAG1 JASPAR yes 70787507
chr19 3485211 3485216 SP1 TRANSFAC yes 70787508
chr19 3485217 3485238 ZNF263 JASPAR yes 70787509
chr19 3485220 3485239 REST JASPAR yes 70787510
chr19 3485220 3485241 ZNF263 JASPAR yes 70787511
chr19 3485245 3485249 H4TF2 TRANSFAC yes 70787512
chr19 3485256 3485261 ETS2 TRANSFAC yes 70787513
chr19 3485277 3485295 NR3C1 JASPAR yes 70787514
chr19 3485280 3485301 IRF1 JASPAR yes 70787515
chr19 3485282 3485303 IRF1 JASPAR yes 70787516
chr19 3485283 3485287 YY1 TRANSFAC yes 70787517
chr19 3485283 3485298 FOXP1 JASPAR yes 70787518
chr19 3485283 3485304 IRF1 JASPAR yes 70787519
chr19 3485284 3485299 FOXP1 JASPAR yes 70787520
chr19 3485284 3485305 IRF1 JASPAR yes 70787521
chr19 3485285 3485300 FOXP1 JASPAR yes 70787522
chr19 3485285 3485306 IRF1 JASPAR yes 70787523
chr19 3485286 3485301 FOXP1 JASPAR yes 70787524
chr19 3485286 3485307 IRF1 JASPAR yes 70787525
chr19 3485287 3485302 FOXP1 JASPAR yes 70787526
chr19 3485287 3485308 IRF1 JASPAR yes 70787527
chr19 3485288 3485303 FOXP1 JASPAR yes 70787528
chr19 3485288 3485309 IRF1 JASPAR yes 70787529
chr19 3485289 3485304 FOXP1 JASPAR yes 70787530
chr19 3485289 3485310 IRF1 JASPAR yes 70787531
chr19 3485290 3485305 FOXP1 JASPAR yes 70787532
chr19 3485291 3485306 FOXP1 JASPAR yes 70787533
chr19 3485292 3485307 FOXP1 JASPAR yes 70787534
chr19 3485293 3485308 FOXP1 JASPAR yes 70787535
chr19 3485294 3485309 FOXP1 JASPAR yes 70787536
chr19 3485295 3485310 FOXP1 JASPAR yes 70787537
chr19 3485296 3485311 FOXP1 JASPAR yes 70787538
SNP sites on vista28296[chr19:3484915-3485311]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3484928 rs184288436 C T
GLIS3 INSM1
5394865
chr19 3484982 rs71339188 T C no 5394866
chr19 3485016 rs546165513 G A,C
CTCF ESR1 PLAG1 ZNF263
5394867
chr19 3485152 rs111800944 G A,C
CTCF H4TF2 RAD21 REST SMC3
5394868
chr19 3485171 rs538020079 CA C
CTCF ID4 RAD21 REST SMC3 SNAI2 TCF3 TCF4
5394869
chr19 3485244 rs144072914 C CTGGT
CTCF RAD21 SMC3
5394870
chr19 3485251 rs574357360 T C
CTCF RAD21 SMC3
5394871
Genes possibly regulated by vista28296[chr19:3484915-3485311]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3474405 3480540 - C19orf77 ENSG00000095932.5 3480540 0.99 0.98 16806 95625
chr19 3490819 3500938 - DOHH ENSG00000129932.3 3500938 0.62 1.0 16807 84373
chr19 3506271 3538328 + FZR1 ENSG00000105325.9 3506271 0.64 1.0 16808 79040
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 11023
chr19 3539152 3544028 + C19orf71 ENSG00000183397.5 3539152 0.83 1.0 16810 46159
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 12536
Expression level of Genes
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miRNAs possibly regulated by vista28296[chr19:3484915-3485311]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results