EnhancerDB
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  3. rs538020079[chr19:3485171]
Enhancers that have rs538020079[chr19:3485171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3484915 3485311 vista28296
VISTA
Transcript factors that have rs538020079[chr19:3485171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3484477 3485466 TCF7L2 GTRD no Colon (HCT116) 108367246
chr19 3484518 3485670 ZNF274 GTRD no Bone Marrow (K562) 108367247
chr19 3484529 3485631 ZNF274 GTRD no Bone Marrow (K562) 108367248
chr19 3484583 3485794 ZBTB33 GTRD no Lung (A549) 108367249
chr19 3484590 3485966 ZNF143 GTRD no Epithelial (MCF-7) 108367250
chr19 3484592 3485670 ZNF274 GTRD no Bone Marrow (K562) 108367251
chr19 3484605 3485819 ZNF274 GTRD no Blood (GM12878) 108367252
chr19 3484624 3485726 ZBTB33 GTRD no Lung (A549) 108367253
chr19 3484633 3486042 ZNF274 GTRD no Cervix (HeLa-S3) 108367254
chr19 3484635 3485403 ZNF274 GTRD no Bone Marrow (K562) 108367255
chr19 3484646 3485648 ZBTB33 GTRD no Lung (A549) 108367256
chr19 3484658 3485801 ZNF143 GTRD no Epithelial (MCF-7) 108367257
chr19 3484664 3485532 ZNF274 GTRD no Bone Marrow (K562) 108367258
chr19 3484741 3485701 ZNF274 GTRD no Blood (GM12878) 108367259
chr19 3484752 3485556 ZNF274 GTRD no Liver (HepG2) 108367260
chr19 3484753 3485556 ZBTB33 GTRD no Lung (A549) 108367261
chr19 3484756 3485584 ZNF274 GTRD no Bone Marrow (K562) 108367262
chr19 3484760 3485414 ZNF274 GTRD no Blood (GM12878) 108367263
chr19 3484761 3485458 ZNF274 GTRD no Bone Marrow (K562) 108367264
chr19 3484763 3485509 ZBTB33 GTRD no Lung (A549) 108367265
chr19 3484774 3485628 ZNF143 GTRD no Epithelial (MCF-7) 108367266
chr19 3484776 3485549 TCF7L2 GTRD no Colon (HCT116) 108367267
chr19 3484780 3485421 ZNF274 GTRD no Cervix (HeLa-S3) 108367268
chr19 3484785 3485477 TCF7L2 GTRD no Colon (HCT116) 108367270
chr19 3484789 3485494 ZNF274 GTRD no Bone Marrow (K562) 108367271
chr19 3484795 3485420 CTCF GTRD no Spleen 108367272
chr19 3484799 3485419 ZNF274 GTRD no Bone Marrow (K562) 108367273
chr19 3484800 3485441 ZNF274 GTRD no Bone Marrow (K562) 108367274
chr19 3484804 3485405 ZBTB33 GTRD no Lung (A549) 108367275
chr19 3484804 3485529 ZNF274 GTRD no Blood (GM12878) 108367276
chr19 3484817 3485454 ZNF274 GTRD no Blood (GM12878) 108367277
chr19 3484820 3485463 TCF7L2 GTRD no Colon (HCT116) 108367278
chr19 3484823 3485304 ZNF143 GTRD no Epithelial (MCF-7) 108367279
chr19 3484826 3485615 ZNF143 GTRD no Epithelial (MCF-7) 108367280
chr19 3484831 3485599 TCF7L2 GTRD no Colon (HCT116) 108367281
chr19 3484833 3485363 ZNF143 GTRD no Epithelial (MCF-7) 108367282
chr19 3484842 3485323 ZNF274 GTRD no Blood (GM12878) 108367283
chr19 3484842 3485441 ZNF274 GTRD no Bone Marrow (K562) 108367284
chr19 3484843 3485470 ZNF274 GTRD no Blood (GM12878) 108367285
chr19 3484845 3485442 ZNF274 GTRD no Blood (GM12878) 108367286
chr19 3484852 3485281 ZNF274 GTRD no Blood (GM12878) 108367287
chr19 3484856 3485501 ZBTB33 GTRD no Lung (A549) 108367288
chr19 3484858 3485466 ZNF143 GTRD no Epithelial (MCF-7) 108367289
chr19 3484870 3485268 TCF7L2 GTRD no Colon (HCT116) 108367290
chr19 3484878 3485381 ZNF274 GTRD no Bone Marrow (K562) 108367291
chr19 3484879 3485311 ZNF274 GTRD no Bone Marrow (K562) 108367292
chr19 3484879 3485488 ZNF274 GTRD no Bone Marrow (K562) 108367293
chr19 3484881 3485417 ZNF274 GTRD no Liver (HepG2) 108367294
chr19 3484883 3485488 ZNF143 GTRD no Epithelial (MCF-7) 108367295
chr19 3484896 3485516 TCF7L2 GTRD no Colon (HCT116) 108367296
chr19 3484897 3485392 ZNF274 GTRD no Blood (GM12878) 108367297
chr19 3484897 3485445 ZNF274 GTRD no Cervix (HeLa-S3) 108367298
chr19 3484904 3485484 ZNF143 GTRD no Epithelial (MCF-7) 108367299
chr19 3484906 3485495 ZNF274 GTRD no Blood (GM12878) 108367300
chr19 3484907 3485384 ZNF274 GTRD no Blood (GM12878) 108367301
chr19 3484909 3485366 ZNF274 GTRD no Bone Marrow (K562) 108367302
chr19 3484914 3485481 CTCF GTRD no Lung 108367303
chr19 3484917 3485263 ZBTB33 GTRD no Lung (A549) 108367304
chr19 3484919 3485441 ZNF274 GTRD no Liver (HepG2) 108367305
chr19 3484930 3485415 ZNF274 GTRD no Blood (GM12878) 108367306
chr19 3484943 3485308 ZNF274 GTRD no Bone Marrow (K562) 108367307
chr19 3484946 3485372 CTCF GTRD no Kidney 108367308
chr19 3484957 3485374 ZNF274 GTRD no Liver (HepG2) 108367309
chr19 3484958 3485457 ZNF274 GTRD no Liver (HepG2) 108367310
chr19 3484963 3485399 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108367311
chr19 3484963 3485427 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367312
chr19 3484964 3485457 ZBTB33 GTRD no Lung (A549) 108367313
chr19 3484972 3485362 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108367314
chr19 3484973 3485447 ZNF274 GTRD no Bone Marrow (K562) 108367315
chr19 3484977 3485304 ZNF274 GTRD no Bone Marrow (K562) 108367316
chr19 3484978 3485284 ZNF274 GTRD no Bone Marrow (K562) 108367317
chr19 3484981 3485317 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108367318
chr19 3484987 3485381 ZNF274 GTRD no Liver (HepG2) 108367319
chr19 3484991 3485395 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108367320
chr19 3484993 3485458 ZNF274 GTRD no Liver (HepG2) 108367321
chr19 3484994 3485338 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108367322
chr19 3484996 3485366 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108367323
chr19 3485001 3485251 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108367324
chr19 3485011 3485347 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108367325
chr19 3485013 3485569 CTCF UCSC Txn Factor no Conserved 108367326
chr19 3485018 3485412 ZNF274 GTRD no Blood (GM12878) 108367327
chr19 3485023 3485313 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108367328
chr19 3485027 3485463 ZNF274 GTRD no Cervix (HeLa-S3) 108367329
chr19 3485030 3485300 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108367330
chr19 3485030 3485326 SMC3 UCSC Txn Factor no Conserved 108367331
chr19 3485030 3485364 ZNF274 GTRD no Bone Marrow (K562) 108367332
chr19 3485031 3485300 ZNF143 GTRD no Epithelial (MCF-7) 108367333
chr19 3485031 3485437 ZNF274 GTRD no Cervix (HeLa-S3) 108367334
chr19 3485036 3485326 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108367335
chr19 3485039 3485271 ZNF274 GTRD no Liver (HepG2) 108367336
chr19 3485041 3485324 ZBTB33 GTRD no Lung (A549) 108367337
chr19 3485046 3485316 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108367338
chr19 3485046 3485336 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108367339
chr19 3485053 3485297 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108367340
chr19 3485053 3485336 RAD21 UCSC Txn Factor no Conserved 108367341
chr19 3485056 3485326 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108367342
chr19 3485059 3485289 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367343
chr19 3485062 3485394 ZNF143 GTRD no Epithelial (MCF-7) 108367344
chr19 3485064 3485293 ZNF274 GTRD no Liver (HepG2) 108367345
chr19 3485073 3485303 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108367346
chr19 3485075 3485276 ZNF274 GTRD no Bone Marrow (K562) 108367347
chr19 3485077 3485267 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108367348
chr19 3485078 3485287 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108367349
chr19 3485083 3485271 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108367350
chr19 3485086 3485361 ZNF274 GTRD no Bone Marrow (K562) 108367351
chr19 3485091 3485240 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367352
chr19 3485091 3485275 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108367353
chr19 3485095 3485271 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108367354
chr19 3485096 3485266 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108367355
chr19 3485097 3485228 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108367356
chr19 3485100 3485267 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108367357
chr19 3485105 3485236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108367358
chr19 3485106 3485272 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108367359
chr19 3485117 3485254 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108367360
chr19 3485135 3485240 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108367361
chr19 3485150 3485171 REST JASPAR yes 70787495
chr19 3485168 3485177 SNAI2 JASPAR yes 70787499
chr19 3485168 3485178 ID4 JASPAR yes 70787500
chr19 3485168 3485178 TCF3 JASPAR yes 70787501
chr19 3485168 3485178 TCF4 JASPAR yes 70787502
chr19 3485171 3485190 CTCF JASPAR yes 70787503
Genes associated with rs538020079[chr19:3485171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More