EnhancerDB
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  3. vista28310[chr19:3655813-3656105]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28310[chr19:3655813-3656105]
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Tissue distribution of vista28310
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Transcription factor that possibly regulate vista28310[chr19:3655813-3656105]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3655839 3655854 AR JASPAR yes 70788083
chr19 3655839 3655854 AR JASPAR yes 112142188
chr19 3655853 3655864 TFAP2A JASPAR yes 70788084
chr19 3655853 3655864 TFAP2B JASPAR yes 70788085
chr19 3655853 3655864 TFAP2A JASPAR yes 112142189
chr19 3655853 3655864 TFAP2B JASPAR yes 112142190
chr19 3655860 3655881 ZNF263 JASPAR yes 70788086
chr19 3655860 3655881 ZNF263 JASPAR yes 112142191
chr19 3655863 3655884 ZNF263 JASPAR yes 70788087
chr19 3655863 3655884 ZNF263 JASPAR yes 112142192
chr19 3655864 3655885 ZNF263 JASPAR yes 70788088
chr19 3655864 3655885 ZNF263 JASPAR yes 112142193
chr19 3655875 3655885 MZF1 JASPAR yes 70788089
chr19 3655875 3655885 MZF1 JASPAR yes 112142194
chr19 3655876 3655886 SP1 JASPAR yes 70788090
chr19 3655876 3655886 SP1 JASPAR yes 112142195
chr19 3655876 3655895 REST JASPAR yes 70788091
chr19 3655876 3655895 REST JASPAR yes 112142196
chr19 3655878 3655884 SP1 TRANSFAC yes 70788092
chr19 3655878 3655884 SP1 TRANSFAC yes 112142197
chr19 3655886 3655891 SP1 TRANSFAC yes 70788093
chr19 3655886 3655891 SP1 TRANSFAC yes 112142198
chr19 3655902 3655916 JUN JASPAR yes 70788094
chr19 3655902 3655916 JUN JASPAR yes 112142199
chr19 3655905 3655916 FOSL2 JASPAR yes 70788095
chr19 3655905 3655916 JUNB JASPAR yes 70788096
chr19 3655905 3655916 FOSL2 JASPAR yes 112142200
chr19 3655905 3655916 JUNB JASPAR yes 112142201
chr19 3655906 3655917 FOS JASPAR yes 70788097
chr19 3655906 3655917 FOSL1 JASPAR yes 70788098
chr19 3655906 3655917 JUND JASPAR yes 70788099
chr19 3655906 3655917 NFE2 JASPAR yes 70788100
chr19 3655906 3655917 FOS JASPAR yes 112142202
chr19 3655906 3655917 FOSL1 JASPAR yes 112142203
chr19 3655906 3655917 JUND JASPAR yes 112142204
chr19 3655906 3655917 NFE2 JASPAR yes 112142205
chr19 3655907 3655916 JDP2 JASPAR yes 70788101
chr19 3655907 3655916 JDP2 JASPAR yes 112142206
chr19 3655907 3655918 FOSL2 JASPAR yes 70788102
chr19 3655907 3655918 JUNB JASPAR yes 70788103
chr19 3655907 3655918 FOSL2 JASPAR yes 112142207
chr19 3655907 3655918 JUNB JASPAR yes 112142208
chr19 3655927 3655932 SP1 TRANSFAC yes 70788104
chr19 3655927 3655932 SP1 TRANSFAC yes 112142209
chr19 3655947 3655966 PAX5 JASPAR yes 70788105
chr19 3655947 3655966 PAX5 JASPAR yes 112142210
chr19 3655960 3655972 NHLH1 JASPAR yes 70788106
chr19 3655960 3655972 NHLH1 JASPAR yes 112142211
chr19 3655961 3655971 MSC JASPAR yes 70788107
chr19 3655961 3655971 NHLH1 JASPAR yes 70788108
chr19 3655961 3655971 TFAP4 JASPAR yes 70788109
chr19 3655961 3655971 MSC JASPAR yes 112142212
chr19 3655961 3655971 NHLH1 JASPAR yes 112142213
chr19 3655961 3655971 TFAP4 JASPAR yes 112142214
chr19 3655961 3655973 TAL1 JASPAR yes 70788110
chr19 3655961 3655973 TAL1 JASPAR yes 112142215
chr19 3655979 3655998 CTCF JASPAR yes 70788111
chr19 3655979 3655998 CTCF JASPAR yes 112142216
chr19 3655981 3655993 TAL1 JASPAR yes 70788112
chr19 3655981 3655993 TAL1 JASPAR yes 112142217
chr19 3655983 3655993 OLIG1 JASPAR yes 70788113
chr19 3655983 3655993 OLIG3 JASPAR yes 70788114
chr19 3655983 3655993 OLIG1 JASPAR yes 112142218
chr19 3655983 3655993 OLIG3 JASPAR yes 112142219
chr19 3655983 3655995 TAL1 JASPAR yes 70788115
chr19 3655983 3655995 TAL1 JASPAR yes 112142220
chr19 3655995 3656005 SP1 JASPAR yes 70788116
chr19 3655995 3656005 SP1 JASPAR yes 112142221
chr19 3655998 3656008 MZF1 JASPAR yes 70788117
chr19 3655998 3656008 MZF1 JASPAR yes 112142222
chr19 3656001 3656007 SP1 TRANSFAC yes 70788118
chr19 3656001 3656007 SP1 TRANSFAC yes 112142223
chr19 3656001 3656011 SP1 JASPAR yes 70788119
chr19 3656001 3656011 SP1 JASPAR yes 112142224
chr19 3656008 3656023 HSF1 JASPAR yes 70788120
chr19 3656008 3656023 HSF1 JASPAR yes 112142225
chr19 3656020 3656031 FOS JASPAR yes 70788121
chr19 3656020 3656031 FOSL1 JASPAR yes 70788122
chr19 3656020 3656031 JUND JASPAR yes 70788123
chr19 3656020 3656031 FOS JASPAR yes 112142226
chr19 3656020 3656031 FOSL1 JASPAR yes 112142227
chr19 3656020 3656031 JUND JASPAR yes 112142228
chr19 3656021 3656032 FOSL2 JASPAR yes 70788124
chr19 3656021 3656032 JUNB JASPAR yes 70788125
chr19 3656021 3656032 FOSL2 JASPAR yes 112142229
chr19 3656021 3656032 JUNB JASPAR yes 112142230
chr19 3656021 3656035 JUN JASPAR yes 70788126
chr19 3656021 3656035 JUN JASPAR yes 112142231
chr19 3656027 3656041 PLAG1 JASPAR yes 70788127
chr19 3656027 3656041 PLAG1 JASPAR yes 112142232
chr19 3656036 3656050 PLAG1 JASPAR yes 70788128
chr19 3656036 3656050 PLAG1 JASPAR yes 112142233
chr19 3656037 3656048 EBF1 JASPAR yes 70788129
chr19 3656037 3656048 EBF1 JASPAR yes 112142234
chr19 3656052 3656064 PKNOX1 JASPAR yes 70788130
chr19 3656052 3656064 PKNOX2 JASPAR yes 70788131
chr19 3656052 3656064 TGIF1 JASPAR yes 70788132
chr19 3656052 3656064 TGIF2 JASPAR yes 70788133
chr19 3656052 3656064 PKNOX1 JASPAR yes 112142235
chr19 3656052 3656064 PKNOX2 JASPAR yes 112142236
chr19 3656052 3656064 TGIF1 JASPAR yes 112142237
chr19 3656052 3656064 TGIF2 JASPAR yes 112142238
chr19 3656056 3656069 SMAD2 JASPAR yes 70788134
chr19 3656056 3656069 SMAD2 JASPAR yes 112142239
chr19 3656068 3656077 THAP1 JASPAR yes 70788135
chr19 3656068 3656077 THAP1 JASPAR yes 112142240
chr19 3656068 3656079 GCM1 JASPAR yes 70788136
chr19 3656068 3656079 GCM1 JASPAR yes 112142241
chr19 3656069 3656081 TFAP2A JASPAR yes 70788137
chr19 3656069 3656081 TFAP2B JASPAR yes 70788138
chr19 3656069 3656081 TFAP2C JASPAR yes 70788139
chr19 3656069 3656081 TFAP2A JASPAR yes 112142242
chr19 3656069 3656081 TFAP2B JASPAR yes 112142243
chr19 3656069 3656081 TFAP2C JASPAR yes 112142244
chr19 3656069 3656084 TFAP2A JASPAR yes 70788140
chr19 3656069 3656084 TFAP2A JASPAR yes 112142245
chr19 3656090 3656095 SP1 TRANSFAC yes 70788141
chr19 3656090 3656095 SP1 TRANSFAC yes 112142246
chr19 3656100 3656114 GLIS3 JASPAR yes 70788142
chr19 3656100 3656114 GLIS3 JASPAR yes 112142247
SNP sites on vista28310[chr19:3655813-3656105]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3655818 rs544463791 C T no 5396236
chr19 3655861 rs575004038 G A
TFAP2A TFAP2B ZNF263
5396237
chr19 3655882 rs144111571 C A,G,T
MZF1 REST SP1 ZNF263
5396238
chr19 3655896 rs112855189 C T no 5396239
chr19 3655918 rs564813482 C G,T
FOSL2 JUNB
5396240
chr19 3655977 rs530752565 G A no 5396241
chr19 3656067 rs12983396 C T
SMAD2
5396242
chr19 3656099 rs536118596 C T no 5396243
Genes possibly regulated by vista28310[chr19:3655813-3656105]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3538259 3574288 - MFSD12 ENSG00000161091.8 3574288 0.79 1.0 16809 18475
chr19 3572775 3579086 + HMG20B ENSG00000064961.14 3572775 0.58 1.0 16811 16962
chr19 3585551 3593539 + GIPC3 ENSG00000179855.5 3585551 0.78 0.94 16812 29738
chr19 3594504 3606838 - TBXA2R ENSG00000006638.7 3606838 0.76 1.0 16813 51025
chr19 3610639 3626813 - CACTIN ENSG00000105298.9 3626813 0.64 1.0 16814 71000
chr19 3630181 3700477 - PIP5K1C ENSG00000186111.4 3700477 0.79 1.0 16815 55628
chr19 3708107 3750811 + TJP3 ENSG00000105289.10 3708107 0.78 1.0 16816 47998
Expression level of Genes
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miRNAs possibly regulated by vista28310[chr19:3655813-3656105]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results