EnhancerDB
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  3. rs12983396[chr19:3656067]
Enhancers that have rs12983396[chr19:3656067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3652245 3658493 enh44619
Muscle (A673) Muscle (Myotube)
chr19 3655813 3656105 vista28310
VISTA
Transcript factors that have rs12983396[chr19:3656067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3655252 3656794 TCF7L2 GTRD no Colon (HCT116) 108368067
chr19 3655409 3656788 ZNF274 GTRD no Blood (GM12878) 108368068
chr19 3655417 3656240 ZBTB33 GTRD no Brain (SK-N-SH) 108368069
chr19 3655425 3656926 AR GTRD no Prostate (PC-3) 108368070
chr19 3655453 3656565 ZBTB33 GTRD no Brain (SK-N-SH) 108368071
chr19 3655465 3656253 ZNF274 GTRD no Blood (GM12878) 108368072
chr19 3655491 3657172 TCF7L2 GTRD no Colon (HCT116) 108368073
chr19 3655493 3656238 ZBTB33 GTRD no Brain (SK-N-SH) 108368074
chr19 3655495 3656247 ZBTB33 GTRD no Brain (SK-N-SH) 108368075
chr19 3655496 3656482 ZNF274 GTRD no Bone Marrow (K562) 108368076
chr19 3655518 3656354 ZBTB33 GTRD no Brain (SK-N-SH) 108368077
chr19 3655524 3656571 ZNF274 GTRD no Blood (GM12878) 108368078
chr19 3655532 3656378 ZBTB33 GTRD no Brain (SK-N-SH) 108368079
chr19 3655565 3656627 MYOD GTRD no Muscle (Myoblast) 108368080
chr19 3655566 3656345 ZBTB33 GTRD no Brain (SK-N-SH) 108368081
chr19 3655579 3656241 ZBTB33 GTRD no Brain (SK-N-SH) 108368082
chr19 3655593 3656270 ZNF274 GTRD no Bone Marrow (K562) 108368083
chr19 3655602 3656322 ZBTB33 GTRD no Brain (SK-N-SH) 108368084
chr19 3655614 3656289 ZNF274 GTRD no Blood (GM12878) 108368085
chr19 3655626 3656287 TEF1 GTRD no Bone (Osteoblast) 108368086
chr19 3655634 3656276 ZBTB33 GTRD no Brain (SK-N-SH) 108368087
chr19 3655635 3657410 TCF7L2 GTRD no Colon (HCT116) 108368088
chr19 3655639 3656200 TEF1 GTRD no Bone (Osteoblast) 108368089
chr19 3655646 3656294 ZBTB33 GTRD no Brain (SK-N-SH) 108368090
chr19 3655662 3656646 TCF7L2 GTRD no Colon (HCT116) 108368091
chr19 3655663 3656239 ZNF274 GTRD no Bone Marrow (K562) 108368092
chr19 3655679 3656264 ZNF274 GTRD no Blood (GM12878) 108368093
chr19 3655686 3656147 ZNF274 GTRD no Blood (GM12878) 108368094
chr19 3655691 3656279 ZBTB33 GTRD no Brain (SK-N-SH) 108368095
chr19 3655703 3656485 ZNF274 GTRD no Blood (GM12878) 108368096
chr19 3655707 3656164 ZNF274 GTRD no Blood (GM12878) 108368097
chr19 3655719 3656115 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108368098
chr19 3655723 3656228 ZNF274 GTRD no Blood (GM12878) 108368099
chr19 3655728 3656171 ZBTB33 GTRD no Brain (SK-N-SH) 108368100
chr19 3655738 3656147 ZNF274 GTRD no Bone Marrow (K562) 108368101
chr19 3655751 3656536 TCF7L2 GTRD no Colon (HCT116) 108368102
chr19 3655775 3656522 ZNF274 GTRD no Blood (GM12878) 108368103
chr19 3655803 3656726 ZNF274 GTRD no Blood (GM12878) 108368104
chr19 3655841 3656569 ZNF274 GTRD no Blood (GM12878) 108368107
chr19 3655857 3656219 ZNF274 GTRD no Blood (GM12878) 108368108
chr19 3655905 3656229 ZNF274 GTRD no Blood (GM12878) 108368109
chr19 3655948 3656102 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108368110
chr19 3656000 3656075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108368112
chr19 3656056 3656069 SMAD2 JASPAR yes 70788134
chr19 3656056 3656069 SMAD2 JASPAR yes 112142239
Genes associated with rs12983396[chr19:3656067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More