EnhancerDB
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  3. vista28356[chr19:4568924-4569300]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28356[chr19:4568924-4569300]
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Tissue distribution of vista28356
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Transcription factor that possibly regulate vista28356[chr19:4568924-4569300]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 4568921 4568929 MEIS2 JASPAR yes 70790589
chr19 4568921 4568929 MEIS2 JASPAR yes 112174392
chr19 4568922 4568926 NFE TRANSFAC yes 70790590
chr19 4568922 4568926 NFE TRANSFAC yes 112174393
chr19 4568922 4568929 MEIS1 JASPAR yes 70790591
chr19 4568922 4568929 MEIS1 JASPAR yes 112174394
chr19 4568925 4568940 FOXP1 JASPAR yes 70790592
chr19 4568925 4568940 FOXP1 JASPAR yes 112174395
chr19 4568926 4568941 FOXP1 JASPAR yes 70790593
chr19 4568926 4568941 FOXP1 JASPAR yes 112174396
chr19 4568926 4568947 IRF1 JASPAR yes 70790594
chr19 4568926 4568947 IRF1 JASPAR yes 112174397
chr19 4568927 4568942 FOXP1 JASPAR yes 70790595
chr19 4568927 4568942 FOXP1 JASPAR yes 112174398
chr19 4568927 4568948 IRF1 JASPAR yes 70790596
chr19 4568927 4568948 IRF1 JASPAR yes 112174399
chr19 4568928 4568943 FOXP1 JASPAR yes 70790597
chr19 4568928 4568943 FOXP1 JASPAR yes 112174400
chr19 4568928 4568949 IRF1 JASPAR yes 70790598
chr19 4568928 4568949 IRF1 JASPAR yes 112174401
chr19 4568929 4568944 FOXP1 JASPAR yes 70790599
chr19 4568929 4568944 FOXP1 JASPAR yes 112174402
chr19 4568930 4568945 FOXP1 JASPAR yes 70790600
chr19 4568930 4568945 FOXP1 JASPAR yes 112174403
chr19 4568930 4568951 IRF1 JASPAR yes 70790601
chr19 4568930 4568951 IRF1 JASPAR yes 112174404
chr19 4568931 4568946 FOXP1 JASPAR yes 70790602
chr19 4568931 4568946 FOXP1 JASPAR yes 112174405
chr19 4568931 4568952 IRF1 JASPAR yes 70790603
chr19 4568931 4568952 IRF1 JASPAR yes 112174406
chr19 4568932 4568947 FOXP1 JASPAR yes 70790604
chr19 4568932 4568947 FOXP1 JASPAR yes 112174407
chr19 4568935 4568950 STAT2 JASPAR yes 70790605
chr19 4568935 4568950 STAT2 JASPAR yes 112174408
chr19 4568956 4568967 ESRRA JASPAR yes 70790606
chr19 4568956 4568967 ESRRA JASPAR yes 112174409
chr19 4568960 4568964 LFA1 TRANSFAC yes 70790607
chr19 4568960 4568964 LFA1 TRANSFAC yes 112174410
chr19 4568968 4568988 ESR1 JASPAR yes 70790608
chr19 4568968 4568988 ESR1 JASPAR yes 112174411
chr19 4568973 4568988 ESR2 JASPAR yes 70790609
chr19 4568973 4568988 ESR2 JASPAR yes 112174412
chr19 4568975 4568981 YY1 JASPAR yes 70790610
chr19 4568975 4568981 YY1 JASPAR yes 112174413
chr19 4568977 4568997 TP63 JASPAR yes 70790611
chr19 4568977 4568997 TP63 JASPAR yes 112174414
chr19 4568977 4568998 ZNF263 JASPAR yes 70790612
chr19 4568977 4568998 ZNF263 JASPAR yes 112174415
chr19 4568981 4568987 NFE2 TRANSFAC yes 70790613
chr19 4568981 4568987 NFE2 TRANSFAC yes 112174416
chr19 4568984 4568990 SP1 TRANSFAC yes 70790614
chr19 4568984 4568990 SP1 TRANSFAC yes 112174417
chr19 4568986 4568991 SP1 TRANSFAC yes 70790615
chr19 4568986 4568991 SP1 TRANSFAC yes 112174418
chr19 4569000 4569004 H1TF2 TRANSFAC yes 70790616
chr19 4569000 4569004 NFE TRANSFAC yes 70790617
chr19 4569000 4569004 SRF TRANSFAC yes 70790618
chr19 4569000 4569004 H1TF2 TRANSFAC yes 112174419
chr19 4569000 4569004 NFE TRANSFAC yes 112174420
chr19 4569000 4569004 SRF TRANSFAC yes 112174421
chr19 4569018 4569023 TFAP2A TRANSFAC yes 70790619
chr19 4569018 4569023 TFAP2A TRANSFAC yes 112174422
chr19 4569018 4569024 MZF1 JASPAR yes 70790620
chr19 4569018 4569024 MZF1 JASPAR yes 112174423
chr19 4569118 4569136 MAFF JASPAR yes 70790621
chr19 4569118 4569136 MAFF JASPAR yes 112174424
chr19 4569119 4569134 MAFK JASPAR yes 70790622
chr19 4569119 4569134 MAFK JASPAR yes 112174425
chr19 4569122 4569134 NHLH1 JASPAR yes 70790623
chr19 4569122 4569134 NHLH1 JASPAR yes 112174426
chr19 4569123 4569133 MSC JASPAR yes 70790624
chr19 4569123 4569133 NHLH1 JASPAR yes 70790625
chr19 4569123 4569133 TFAP4 JASPAR yes 70790626
chr19 4569123 4569133 MSC JASPAR yes 112174427
chr19 4569123 4569133 NHLH1 JASPAR yes 112174428
chr19 4569123 4569133 TFAP4 JASPAR yes 112174429
chr19 4569133 4569143 RUNX3 JASPAR yes 70790627
chr19 4569133 4569143 RUNX3 JASPAR yes 112174430
chr19 4569133 4569145 INSM1 JASPAR yes 70790628
chr19 4569133 4569145 INSM1 JASPAR yes 112174431
chr19 4569158 4569172 PAX6 JASPAR yes 70790629
chr19 4569158 4569172 PAX6 JASPAR yes 112174432
chr19 4569160 4569175 STAT2 JASPAR yes 70790630
chr19 4569160 4569175 STAT2 JASPAR yes 112174433
chr19 4569161 4569175 STAT1 JASPAR yes 70790631
chr19 4569161 4569175 STAT1 JASPAR yes 112174434
chr19 4569172 4569178 MZF1 JASPAR yes 70790632
chr19 4569172 4569178 MZF1 JASPAR yes 112174435
chr19 4569194 4569210 POU4F2 JASPAR yes 70790633
chr19 4569194 4569210 POU4F3 JASPAR yes 70790634
chr19 4569194 4569210 POU4F2 JASPAR yes 112174436
chr19 4569194 4569210 POU4F3 JASPAR yes 112174437
chr19 4569196 4569210 POU4F1 JASPAR yes 70790635
chr19 4569196 4569210 POU4F1 JASPAR yes 112174438
chr19 4569203 4569217 PAX6 JASPAR yes 70790636
chr19 4569203 4569217 PAX6 JASPAR yes 112174439
chr19 4569222 4569236 SPIC JASPAR yes 70790637
chr19 4569222 4569236 SPIC JASPAR yes 112174440
chr19 4569234 4569244 TEAD1 JASPAR yes 70790638
chr19 4569234 4569244 TEAD1 JASPAR yes 112174441
chr19 4569246 4569262 NFYA JASPAR yes 70790639
chr19 4569246 4569262 NFYA JASPAR yes 112174442
chr19 4569251 4569255 H1TF2 TRANSFAC yes 70790640
chr19 4569251 4569255 NFE TRANSFAC yes 70790641
chr19 4569251 4569255 SRF TRANSFAC yes 70790642
chr19 4569251 4569255 H1TF2 TRANSFAC yes 112174443
chr19 4569251 4569255 NFE TRANSFAC yes 112174444
chr19 4569251 4569255 SRF TRANSFAC yes 112174445
chr19 4569267 4569277 OLIG2 JASPAR yes 70790643
chr19 4569267 4569277 OLIG3 JASPAR yes 70790644
chr19 4569267 4569277 OLIG2 JASPAR yes 112174446
chr19 4569267 4569277 OLIG3 JASPAR yes 112174447
chr19 4569285 4569289 YY1 TRANSFAC yes 70790645
chr19 4569285 4569289 YY1 TRANSFAC yes 112174448
chr19 4569290 4569296 TCF4 TRANSFAC yes 70790646
chr19 4569290 4569296 TCF4 TRANSFAC yes 112174449
SNP sites on vista28356[chr19:4568924-4569300]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 4568961 rs116062767 G A
ESRRA LFA1
5401289
chr19 4569115 rs182571843 C T no 5401290
chr19 4569135 rs73920854 G C
INSM1 MAFF RUNX3
5401291
chr19 4569240 rs11881762 A G
TEAD1
5401292
chr19 4569266 rs117233473 G A no 5401293
Genes possibly regulated by vista28356[chr19:4568924-4569300]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 4472284 4502223 + HDGFRP2 ENSG00000167674.10 4472284 0.71 1.0 16843 3360
chr19 4502204 4517716 - PLIN4 ENSG00000167676.3 4517716 0.94 1.0 16844 48792
chr19 4522543 4535236 - PLIN5 ENSG00000214456.4 4535236 0.87 1.0 16845 66312
chr19 4528439 4540079 - CTB-50L17.14 ENSG00000267385.1 4540079 0.98 1.0 16846 71155
chr19 4536421 4540486 - LRG1 ENSG00000171236.9 4540486 1.0 0.99 16847 71562
chr19 4542600 4559820 - SEMA6B ENSG00000167680.11 4559820 0.88 1.0 16848 90896
chr19 4639530 4655580 + TNFAIP8L1 ENSG00000185361.4 4639530 0.73 1.0 16849 29770
Expression level of Genes
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miRNAs possibly regulated by vista28356[chr19:4568924-4569300]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results