EnhancerDB
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  3. rs116062767[chr19:4568961]
Enhancers that have rs116062767[chr19:4568961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4562990 4590495 enh17872
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Spleen Uterus Stomach
chr19 4568924 4569300 vista28356
VISTA
Transcript factors that have rs116062767[chr19:4568961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 21841499
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372159
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372160
chr19 4566417 4569437 TCF7L2 GTRD no Colon (HCT116) 108372161
chr19 4568399 4569157 ZNF274 GTRD no Bone Marrow (K562) 108372333
chr19 4568651 4569046 ZBTB33 GTRD no Lung (A549) 108372334
chr19 4568690 4569084 ZNF274 GTRD no Bone Marrow (K562) 108372335
chr19 4568811 4569019 ZNF274 GTRD no Liver (HepG2) 21841539
chr19 4568811 4569019 ZNF274 GTRD no Liver (HepG2) 108372336
chr19 4568858 4569308 ZNF274 GTRD no Blood (GM12878) 108372337
chr19 4568903 4569265 ZNF274 GTRD no Bone Marrow (K562) 108372338
chr19 4568910 4569249 ZNF274 GTRD no Bone Marrow (K562) 108372339
chr19 4568913 4569292 ZNF274 GTRD no Bone Marrow (K562) 108372340
chr19 4568956 4568967 ESRRA JASPAR yes 70790606
chr19 4568956 4568967 ESRRA JASPAR yes 112174409
chr19 4568960 4568964 LFA1 TRANSFAC yes 70790607
chr19 4568960 4568964 LFA1 TRANSFAC yes 112174410
Genes associated with rs116062767[chr19:4568961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More