EnhancerDB
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  3. vista28379[chr19:5127836-5128030]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28379[chr19:5127836-5128030]
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Tissue distribution of vista28379
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Transcription factor that possibly regulate vista28379[chr19:5127836-5128030]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5127832 5127853 REST JASPAR yes 70791656
chr19 5127832 5127853 REST JASPAR yes 112218154
chr19 5127841 5127858 RARA JASPAR yes 70791657
chr19 5127841 5127858 RARA JASPAR yes 112218155
chr19 5127842 5127857 TFAP2A JASPAR yes 70791658
chr19 5127842 5127857 TFAP2C JASPAR yes 70791659
chr19 5127842 5127857 TFAP2A JASPAR yes 112218156
chr19 5127842 5127857 TFAP2C JASPAR yes 112218157
chr19 5127843 5127854 TFAP2A JASPAR yes 70791660
chr19 5127843 5127854 TFAP2B JASPAR yes 70791661
chr19 5127843 5127854 TFAP2C JASPAR yes 70791662
chr19 5127843 5127854 TFAP2A JASPAR yes 112218158
chr19 5127843 5127854 TFAP2B JASPAR yes 112218159
chr19 5127843 5127854 TFAP2C JASPAR yes 112218160
chr19 5127844 5127853 TFAP2A JASPAR yes 70791663
chr19 5127844 5127853 TFAP2A JASPAR yes 112218161
chr19 5127849 5127854 SP1 TRANSFAC yes 70791664
chr19 5127849 5127854 SP1 TRANSFAC yes 112218162
chr19 5127853 5127857 ESR1 TRANSFAC yes 70791665
chr19 5127853 5127857 ESR1 TRANSFAC yes 112218163
chr19 5127854 5127864 SREBF1 JASPAR yes 70791666
chr19 5127854 5127864 SREBF2 JASPAR yes 70791667
chr19 5127854 5127864 SREBF1 JASPAR yes 112218164
chr19 5127854 5127864 SREBF2 JASPAR yes 112218165
chr19 5127855 5127863 MGA JASPAR yes 70791668
chr19 5127855 5127863 MGA JASPAR yes 112218166
chr19 5127864 5127869 SP1 TRANSFAC yes 70791669
chr19 5127864 5127869 SP1 TRANSFAC yes 112218167
chr19 5127864 5127870 SP1 TRANSFAC yes 70791670
chr19 5127864 5127870 SP1 TRANSFAC yes 112218168
chr19 5127875 5127891 ZNF143 JASPAR yes 70791671
chr19 5127875 5127891 ZNF143 JASPAR yes 112218169
chr19 5127876 5127887 EBF1 JASPAR yes 70791672
chr19 5127876 5127887 EBF1 JASPAR yes 112218170
chr19 5127876 5127890 PLAG1 JASPAR yes 70791673
chr19 5127876 5127890 PLAG1 JASPAR yes 112218171
chr19 5127908 5127927 REST JASPAR yes 70791674
chr19 5127908 5127927 REST JASPAR yes 112218172
chr19 5127920 5127930 SP1 JASPAR yes 70791675
chr19 5127920 5127930 SP1 JASPAR yes 112218173
chr19 5127921 5127931 SP1 JASPAR yes 70791676
chr19 5127921 5127931 SP1 JASPAR yes 112218174
chr19 5127922 5127927 SP1 TRANSFAC yes 70791677
chr19 5127922 5127927 SP1 TRANSFAC yes 112218175
chr19 5127923 5127928 SP1 TRANSFAC yes 70791678
chr19 5127923 5127928 SP1 TRANSFAC yes 112218176
chr19 5127923 5127929 SP1 TRANSFAC yes 70791679
chr19 5127923 5127929 SP1 TRANSFAC yes 112218177
chr19 5127925 5127936 NFKB1 JASPAR yes 70791680
chr19 5127925 5127936 NFKB1 JASPAR yes 112218178
chr19 5127925 5127938 NFKB1 JASPAR yes 70791681
chr19 5127925 5127938 NFKB2 JASPAR yes 70791682
chr19 5127925 5127938 NFKB1 JASPAR yes 112218179
chr19 5127925 5127938 NFKB2 JASPAR yes 112218180
chr19 5127926 5127936 NFKB1 JASPAR yes 70791683
chr19 5127926 5127936 NFKB1 JASPAR yes 112218181
chr19 5127926 5127937 NFKB1 JASPAR yes 70791684
chr19 5127926 5127937 NFKB1 JASPAR yes 112218182
chr19 5127927 5127937 NFKB1 JASPAR yes 70791685
chr19 5127927 5127937 NFKB1 JASPAR yes 112218183
chr19 5127930 5127944 EBF1 JASPAR yes 70791686
chr19 5127930 5127944 EBF1 JASPAR yes 112218184
chr19 5127931 5127942 EBF1 JASPAR yes 70791687
chr19 5127931 5127942 EBF1 JASPAR yes 112218185
chr19 5127931 5127945 PLAG1 JASPAR yes 70791688
chr19 5127931 5127945 PLAG1 JASPAR yes 112218186
chr19 5127932 5127938 MZF1 JASPAR yes 70791689
chr19 5127932 5127938 MZF1 JASPAR yes 112218187
chr19 5127952 5127967 SCRT1 JASPAR yes 70791690
chr19 5127952 5127967 SCRT1 JASPAR yes 112218188
chr19 5127953 5127963 ID4 JASPAR yes 70791691
chr19 5127953 5127963 TCF3 JASPAR yes 70791692
chr19 5127953 5127963 TCF4 JASPAR yes 70791693
chr19 5127953 5127963 ID4 JASPAR yes 112218189
chr19 5127953 5127963 TCF3 JASPAR yes 112218190
chr19 5127953 5127963 TCF4 JASPAR yes 112218191
chr19 5127954 5127963 SNAI2 JASPAR yes 70791694
chr19 5127954 5127963 SNAI2 JASPAR yes 112218192
chr19 5127955 5127960 USF2 TRANSFAC yes 70791695
chr19 5127955 5127960 USF2 TRANSFAC yes 112218193
chr19 5127960 5127975 ZBTB33 JASPAR yes 70791696
chr19 5127960 5127975 ZBTB33 JASPAR yes 112218194
chr19 5127963 5127973 TFE3 JASPAR yes 70791697
chr19 5127963 5127973 TFE3 JASPAR yes 112218195
chr19 5127963 5127978 ZBTB33 JASPAR yes 70791698
chr19 5127963 5127978 ZBTB33 JASPAR yes 112218196
chr19 5128018 5128037 REST JASPAR yes 70791699
chr19 5128018 5128037 REST JASPAR yes 112218197
SNP sites on vista28379[chr19:5127836-5128030]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5127861 rs550025150 C G
MGA SREBF1 SREBF2
5407150
chr19 5127870 rs569722274 C T
SP1
5407151
chr19 5127896 rs548132985 TC T no 5407152
chr19 5127897 rs741697 C A,G no 5407153
chr19 5127927 rs28667977 G A
NFKB1 NFKB2 REST SP1
5407154
chr19 5127968 rs3070222 C CAT
TFE3 ZBTB33
5407155
Genes possibly regulated by vista28379[chr19:5127836-5128030]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista28379[chr19:5127836-5128030]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results