EnhancerDB
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  3. rs28667977[chr19:5127927]
Enhancers that have rs28667977[chr19:5127927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5119813 5130815 enh4978
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Ovary Lung Stomach Muscle (A673) Placenta Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Heart
chr19 5127836 5128030 vista28379
VISTA
Transcript factors that have rs28667977[chr19:5127927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5125717 5128716 ZNF274 GTRD no Blood (GM12878) 108374648
chr19 5125717 5128716 ZNF274 GTRD no Blood (GM12878) 108374649
chr19 5125719 5128249 ZNF274 GTRD no Blood (GM12878) 108374650
chr19 5125719 5128249 ZNF274 GTRD no Blood (GM12878) 108374651
chr19 5125853 5134054 ZNF274 GTRD no Blood (GM12878) 108374652
chr19 5125853 5134054 ZNF274 GTRD no Blood (GM12878) 108374653
chr19 5126083 5128669 ZNF274 GTRD no Blood (GM12878) 108374656
chr19 5126083 5128669 ZNF274 GTRD no Blood (GM12878) 108374657
chr19 5126576 5127942 ZNF274 GTRD no Blood (GM12878) 108374663
chr19 5126576 5127942 ZNF274 GTRD no Blood (GM12878) 108374664
chr19 5126648 5128156 ZNF274 GTRD no Blood (GM12878) 108374665
chr19 5126648 5128156 ZNF274 GTRD no Blood (GM12878) 108374666
chr19 5127567 5128202 ZNF274 GTRD no Blood (GM12878) 108374672
chr19 5127574 5129566 TCF7L2 GTRD no Colon (HCT116) 108374673
chr19 5127607 5128166 ZNF274 GTRD no Blood (GM12878) 108374674
chr19 5127641 5129159 TCF7L2 GTRD no Colon (HCT116) 108374675
chr19 5127656 5128218 ZNF274 GTRD no Blood (GM12878) 108374676
chr19 5127694 5128239 ZNF274 GTRD no Blood (GM12878) 108374677
chr19 5127726 5128018 TCF7L2 GTRD no Colon (HCT116) 108374678
chr19 5127738 5130032 ZNF274 GTRD no Bone Marrow (K562) 21843076
chr19 5127738 5130032 ZNF274 GTRD no Bone Marrow (K562) 108374679
chr19 5127752 5128097 ZNF274 GTRD no Blood (GM12878) 108374680
chr19 5127763 5128031 ZNF274 GTRD no Blood (GM12878) 108374681
chr19 5127848 5129519 TCF7L2 GTRD no Colon (HCT116) 108374682
chr19 5127867 5127985 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108374683
chr19 5127878 5129494 TCF7L2 GTRD no Colon (HCT116) 108374684
chr19 5127908 5127927 REST JASPAR yes 70791674
chr19 5127908 5127927 REST JASPAR yes 112218172
chr19 5127920 5127930 SP1 JASPAR yes 70791675
chr19 5127920 5127930 SP1 JASPAR yes 112218173
chr19 5127921 5127931 SP1 JASPAR yes 70791676
chr19 5127921 5127931 SP1 JASPAR yes 112218174
chr19 5127922 5127927 SP1 TRANSFAC yes 70791677
chr19 5127922 5127927 SP1 TRANSFAC yes 112218175
chr19 5127923 5127928 SP1 TRANSFAC yes 70791678
chr19 5127923 5127928 SP1 TRANSFAC yes 112218176
chr19 5127923 5127929 SP1 TRANSFAC yes 70791679
chr19 5127923 5127929 SP1 TRANSFAC yes 112218177
chr19 5127925 5127936 NFKB1 JASPAR yes 70791680
chr19 5127925 5127936 NFKB1 JASPAR yes 112218178
chr19 5127925 5127938 NFKB1 JASPAR yes 70791681
chr19 5127925 5127938 NFKB2 JASPAR yes 70791682
chr19 5127925 5127938 NFKB1 JASPAR yes 112218179
chr19 5127925 5127938 NFKB2 JASPAR yes 112218180
chr19 5127926 5127936 NFKB1 JASPAR yes 70791683
chr19 5127926 5127936 NFKB1 JASPAR yes 112218181
chr19 5127926 5127937 NFKB1 JASPAR yes 70791684
chr19 5127926 5127937 NFKB1 JASPAR yes 112218182
chr19 5127927 5127937 NFKB1 JASPAR yes 70791685
chr19 5127927 5127937 NFKB1 JASPAR yes 112218183
Genes associated with rs28667977[chr19:5127927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More