EnhancerDB
  1. Home
  2. Enhancers
  3. vista28404[chr19:5953003-5953253]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28404[chr19:5953003-5953253]
Back to top
Tissue distribution of vista28404
Back to top
Transcription factor that possibly regulate vista28404[chr19:5953003-5953253]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 5952998 5953013 MEF2A JASPAR yes 70792856
chr19 5952998 5953013 MEF2A JASPAR yes 112247395
chr19 5952999 5953011 MEF2A JASPAR yes 70792857
chr19 5952999 5953011 MEF2D JASPAR yes 70792858
chr19 5952999 5953011 MEF2A JASPAR yes 112247396
chr19 5952999 5953011 MEF2D JASPAR yes 112247397
chr19 5953001 5953011 ALX3 JASPAR yes 70792859
chr19 5953001 5953011 EMX2 JASPAR yes 70792860
chr19 5953001 5953011 GSX1 JASPAR yes 70792861
chr19 5953001 5953011 GSX2 JASPAR yes 70792862
chr19 5953001 5953011 HOXB2 JASPAR yes 70792863
chr19 5953001 5953011 HOXB3 JASPAR yes 70792864
chr19 5953001 5953011 LBX2 JASPAR yes 70792865
chr19 5953001 5953011 LHX2 JASPAR yes 70792866
chr19 5953001 5953011 MIXL1 JASPAR yes 70792867
chr19 5953001 5953011 MNX1 JASPAR yes 70792868
chr19 5953001 5953011 NOTO JASPAR yes 70792869
chr19 5953001 5953011 ALX3 JASPAR yes 112247398
chr19 5953001 5953011 EMX2 JASPAR yes 112247399
chr19 5953001 5953011 GSX1 JASPAR yes 112247400
chr19 5953001 5953011 GSX2 JASPAR yes 112247401
chr19 5953001 5953011 HOXB2 JASPAR yes 112247402
chr19 5953001 5953011 HOXB3 JASPAR yes 112247403
chr19 5953001 5953011 LBX2 JASPAR yes 112247404
chr19 5953001 5953011 LHX2 JASPAR yes 112247405
chr19 5953001 5953011 MIXL1 JASPAR yes 112247406
chr19 5953001 5953011 MNX1 JASPAR yes 112247407
chr19 5953001 5953011 NOTO JASPAR yes 112247408
chr19 5953002 5953010 EN1 JASPAR yes 70792870
chr19 5953002 5953010 ISX JASPAR yes 70792871
chr19 5953002 5953010 LBX1 JASPAR yes 70792872
chr19 5953002 5953010 LHX9 JASPAR yes 70792873
chr19 5953002 5953010 PAX4 JASPAR yes 70792874
chr19 5953002 5953010 PDX1 JASPAR yes 70792875
chr19 5953002 5953010 PRRX1 JASPAR yes 70792876
chr19 5953002 5953010 RAX2 JASPAR yes 70792877
chr19 5953002 5953010 SHOX JASPAR yes 70792878
chr19 5953002 5953010 UNCX JASPAR yes 70792879
chr19 5953002 5953010 VAX1 JASPAR yes 70792880
chr19 5953002 5953010 VAX2 JASPAR yes 70792881
chr19 5953002 5953010 VSX1 JASPAR yes 70792882
chr19 5953002 5953010 VSX2 JASPAR yes 70792883
chr19 5953002 5953010 EN1 JASPAR yes 112247409
chr19 5953002 5953010 ISX JASPAR yes 112247410
chr19 5953002 5953010 LBX1 JASPAR yes 112247411
chr19 5953002 5953010 LHX9 JASPAR yes 112247412
chr19 5953002 5953010 PAX4 JASPAR yes 112247413
chr19 5953002 5953010 PDX1 JASPAR yes 112247414
chr19 5953002 5953010 PRRX1 JASPAR yes 112247415
chr19 5953002 5953010 RAX2 JASPAR yes 112247416
chr19 5953002 5953010 SHOX JASPAR yes 112247417
chr19 5953002 5953010 UNCX JASPAR yes 112247418
chr19 5953002 5953010 VAX1 JASPAR yes 112247419
chr19 5953002 5953010 VAX2 JASPAR yes 112247420
chr19 5953002 5953010 VSX1 JASPAR yes 112247421
chr19 5953002 5953010 VSX2 JASPAR yes 112247422
chr19 5953011 5953021 NKX2-3 JASPAR yes 70792884
chr19 5953011 5953021 NKX2-3 JASPAR yes 112247423
chr19 5953012 5953021 NKX2-8 JASPAR yes 70792885
chr19 5953012 5953021 NKX2-8 JASPAR yes 112247424
chr19 5953023 5953034 NFIL3 JASPAR yes 70792886
chr19 5953023 5953034 NFIL3 JASPAR yes 112247425
chr19 5953036 5953047 CEBPA JASPAR yes 70792887
chr19 5953036 5953047 CEBPA JASPAR yes 112247426
chr19 5953042 5953055 POU3F3 JASPAR yes 70792888
chr19 5953042 5953055 POU3F3 JASPAR yes 112247427
chr19 5953043 5953054 FOXA1 JASPAR yes 70792889
chr19 5953043 5953054 FOXA1 JASPAR yes 112247428
chr19 5953043 5953055 POU3F1 JASPAR yes 70792890
chr19 5953043 5953055 POU3F2 JASPAR yes 70792891
chr19 5953043 5953055 POU3F1 JASPAR yes 112247429
chr19 5953043 5953055 POU3F2 JASPAR yes 112247430
chr19 5953043 5953056 POU2F2 JASPAR yes 70792892
chr19 5953043 5953056 POU2F2 JASPAR yes 112247431
chr19 5953043 5953058 FOXA1 JASPAR yes 70792893
chr19 5953043 5953058 FOXA1 JASPAR yes 112247432
chr19 5953044 5953053 POU3F4 JASPAR yes 70792894
chr19 5953044 5953053 POU5F1B JASPAR yes 70792895
chr19 5953044 5953053 POU3F4 JASPAR yes 112247433
chr19 5953044 5953053 POU5F1B JASPAR yes 112247434
chr19 5953044 5953055 FOXB1 JASPAR yes 70792896
chr19 5953044 5953055 FOXC1 JASPAR yes 70792897
chr19 5953044 5953055 FOXB1 JASPAR yes 112247435
chr19 5953044 5953055 FOXC1 JASPAR yes 112247436
chr19 5953044 5953056 FOXC2 JASPAR yes 70792898
chr19 5953044 5953056 FOXC2 JASPAR yes 112247437
chr19 5953077 5953091 POU1F1 JASPAR yes 70792899
chr19 5953077 5953091 POU1F1 JASPAR yes 112247438
chr19 5953082 5953090 FOXO3 JASPAR yes 70792900
chr19 5953082 5953090 FOXO3 JASPAR yes 112247439
chr19 5953105 5953116 CDX2 JASPAR yes 70792901
chr19 5953105 5953116 CDX2 JASPAR yes 112247440
chr19 5953106 5953117 HOXA10 JASPAR yes 70792902
chr19 5953106 5953117 HOXC11 JASPAR yes 70792903
chr19 5953106 5953117 HOXC12 JASPAR yes 70792904
chr19 5953106 5953117 HOXD12 JASPAR yes 70792905
chr19 5953106 5953117 HOXA10 JASPAR yes 112247441
chr19 5953106 5953117 HOXC11 JASPAR yes 112247442
chr19 5953106 5953117 HOXC12 JASPAR yes 112247443
chr19 5953106 5953117 HOXD12 JASPAR yes 112247444
chr19 5953107 5953116 CDX1 JASPAR yes 70792906
chr19 5953107 5953116 CDX1 JASPAR yes 112247445
chr19 5953107 5953117 HOXC10 JASPAR yes 70792907
chr19 5953107 5953117 HOXD11 JASPAR yes 70792908
chr19 5953107 5953117 HOXC10 JASPAR yes 112247446
chr19 5953107 5953117 HOXD11 JASPAR yes 112247447
chr19 5953110 5953118 FOXG1 JASPAR yes 70792909
chr19 5953110 5953118 FOXG1 JASPAR yes 112247448
chr19 5953126 5953140 TCF7L2 JASPAR yes 70792910
chr19 5953126 5953140 TCF7L2 JASPAR yes 112247449
chr19 5953126 5953141 LEF1 JASPAR yes 70792911
chr19 5953126 5953141 LEF1 JASPAR yes 112247450
chr19 5953165 5953177 PBX1 JASPAR yes 70792912
chr19 5953165 5953177 PBX1 JASPAR yes 112247451
chr19 5953170 5953183 POU2F2 JASPAR yes 70792913
chr19 5953170 5953183 POU2F2 JASPAR yes 112247452
chr19 5953171 5953183 POU3F2 JASPAR yes 70792914
chr19 5953171 5953183 POU3F2 JASPAR yes 112247453
chr19 5953178 5953182 TEAD2 TRANSFAC yes 70792915
chr19 5953178 5953182 TEAD2 TRANSFAC yes 112247454
chr19 5953193 5953204 NFIL3 JASPAR yes 70792916
chr19 5953193 5953204 NFIL3 JASPAR yes 112247455
chr19 5953194 5953205 CEBPB JASPAR yes 70792917
chr19 5953194 5953205 CEBPB JASPAR yes 112247456
chr19 5953194 5953206 DBP JASPAR yes 70792918
chr19 5953194 5953206 HLF JASPAR yes 70792919
chr19 5953194 5953206 JDP2 JASPAR yes 70792920
chr19 5953194 5953206 TEF JASPAR yes 70792921
chr19 5953194 5953206 DBP JASPAR yes 112247457
chr19 5953194 5953206 HLF JASPAR yes 112247458
chr19 5953194 5953206 JDP2 JASPAR yes 112247459
chr19 5953194 5953206 TEF JASPAR yes 112247460
chr19 5953194 5953207 ATF4 JASPAR yes 70792922
chr19 5953194 5953207 ATF4 JASPAR yes 112247461
chr19 5953194 5953209 JUND JASPAR yes 70792923
chr19 5953194 5953209 JUND JASPAR yes 112247462
chr19 5953195 5953208 JUN JASPAR yes 70792924
chr19 5953195 5953208 JUN JASPAR yes 112247463
chr19 5953201 5953212 ELK4 JASPAR yes 70792925
chr19 5953201 5953212 FLI1 JASPAR yes 70792926
chr19 5953201 5953212 ELK4 JASPAR yes 112247464
chr19 5953201 5953212 FLI1 JASPAR yes 112247465
chr19 5953202 5953212 ETV6 JASPAR yes 70792927
chr19 5953202 5953212 GABPA JASPAR yes 70792928
chr19 5953202 5953212 ETV6 JASPAR yes 112247466
chr19 5953202 5953212 GABPA JASPAR yes 112247467
chr19 5953202 5953215 ELF1 JASPAR yes 70792929
chr19 5953202 5953215 ELF1 JASPAR yes 112247468
chr19 5953203 5953210 SPI1 JASPAR yes 70792930
chr19 5953203 5953210 SPI1 JASPAR yes 112247469
chr19 5953203 5953211 EHF JASPAR yes 70792931
chr19 5953203 5953211 EHF JASPAR yes 112247470
chr19 5953205 5953212 SPIB JASPAR yes 70792932
chr19 5953205 5953212 SPIB JASPAR yes 112247471
chr19 5953225 5953234 SRY JASPAR yes 70792933
chr19 5953225 5953234 SRY JASPAR yes 112247472
chr19 5953227 5953230 MYB TRANSFAC yes 70792934
chr19 5953227 5953230 MYB TRANSFAC yes 112247473
chr19 5953227 5953243 SOX4 JASPAR yes 70792935
chr19 5953227 5953243 SOX4 JASPAR yes 112247474
chr19 5953228 5953243 SOX21 JASPAR yes 70792936
chr19 5953228 5953243 SOX21 JASPAR yes 112247475
chr19 5953237 5953252 HSF1 JASPAR yes 70792937
chr19 5953237 5953252 HSF1 JASPAR yes 112247476
chr19 5953238 5953251 HSF1 JASPAR yes 70792938
chr19 5953238 5953251 HSF2 JASPAR yes 70792939
chr19 5953238 5953251 HSF4 JASPAR yes 70792940
chr19 5953238 5953251 HSF1 JASPAR yes 112247477
chr19 5953238 5953251 HSF2 JASPAR yes 112247478
chr19 5953238 5953251 HSF4 JASPAR yes 112247479
chr19 5953244 5953248 YY1 TRANSFAC yes 70792941
chr19 5953244 5953248 YY1 TRANSFAC yes 112247480
SNP sites on vista28404[chr19:5953003-5953253]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 5953015 rs573227012 A G
NKX2-3 NKX2-8
5411588
chr19 5953084 rs115374168 C T
FOXO3 POU1F1
5411589
chr19 5953150 rs113486511 C A,T no 5411590
Genes possibly regulated by vista28404[chr19:5953003-5953253]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5865837 5903798 - FUT5 ENSG00000130383.6 5903798 0.91 0.99 16872 50795
chr19 5866182 5903798 - AC024592.12 ENSG00000267740.1 5903798 0.85 0.85 16873 50795
chr19 5891287 5904017 - NDUFA11 ENSG00000174886.8 5904017 0.83 0.96 16874 51014
chr19 5904852 5914718 + AC104532.2 ENSG00000267314.1 5904852 0.89 0.95 16875 51849
chr19 5904869 5910864 + VMAC ENSG00000187650.3 5904869 0.67 0.98 16876 51866
chr19 5911718 5915888 + CAPS ENSG00000105519.8 5911718 0.82 0.98 16877 58715
chr19 5916150 5978153 - RANBP3 ENSG00000031823.10 5978153 0.53 1.0 16878 75100
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28404[chr19:5953003-5953253]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results